Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Foxc1Q61572 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Foxc1Q61572 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Foxc1Q61572 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Foxc1Q61572 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Foxc1Q61572 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Foxc1Q61572 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Foxc1Q61572 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.56□□□□□ -0.4
Foxc1Q61572 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Foxc1Q61572 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Foxc1Q61572 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Gm5417-201ENSMUST00000079706 384 ntBASIC12.56□□□□□ -0.4
Foxc1Q61572 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.56□□□□□ -0.4
Foxc1Q61572 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Foxc1Q61572 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Foxc1Q61572 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.55□□□□□ -0.4
Foxc1Q61572 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Foxc1Q61572 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Foxc1Q61572 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.55□□□□□ -0.4
Foxc1Q61572 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Foxc1Q61572 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.55□□□□□ -0.4
Foxc1Q61572 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Foxc1Q61572 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.55□□□□□ -0.4
Foxc1Q61572 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Foxc1Q61572 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Foxc1Q61572 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Foxc1Q61572 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Foxc1Q61572 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Foxc1Q61572 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.54□□□□□ -0.4
Foxc1Q61572 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.54□□□□□ -0.4
Foxc1Q61572 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.54□□□□□ -0.4
Foxc1Q61572 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.54□□□□□ -0.4
Foxc1Q61572 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Foxc1Q61572 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Foxc1Q61572 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Foxc1Q61572 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Foxc1Q61572 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Foxc1Q61572 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Foxc1Q61572 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Foxc1Q61572 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Foxc1Q61572 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Foxc1Q61572 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Foxc1Q61572 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms