Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.77■□□□□ 0.28
Cacna1eQ61290 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1eQ61290 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.77■□□□□ 0.27
Cacna1eQ61290 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.77■□□□□ 0.27
Cacna1eQ61290 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1eQ61290 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.77■□□□□ 0.27
Cacna1eQ61290 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1eQ61290 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
Cacna1eQ61290 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Cacna1eQ61290 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1eQ61290 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1eQ61290 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.77■□□□□ 0.27
Cacna1eQ61290 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1eQ61290 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1eQ61290 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cacna1eQ61290 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1eQ61290 Gm18733-201ENSMUST00000173950 856 ntBASIC16.76■□□□□ 0.27
Cacna1eQ61290 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.76■□□□□ 0.27
Cacna1eQ61290 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.76■□□□□ 0.27
Cacna1eQ61290 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.76■□□□□ 0.27
Cacna1eQ61290 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1eQ61290 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1eQ61290 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1eQ61290 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1eQ61290 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1eQ61290 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.76■□□□□ 0.27
Cacna1eQ61290 Gm15372-201ENSMUST00000120729 834 ntBASIC16.76■□□□□ 0.27
Cacna1eQ61290 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.76■□□□□ 0.27
Cacna1eQ61290 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1eQ61290 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1eQ61290 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.75■□□□□ 0.27
Cacna1eQ61290 Gm5864-201ENSMUST00000202263 970 ntBASIC16.75■□□□□ 0.27
Cacna1eQ61290 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cacna1eQ61290 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.75■□□□□ 0.27
Cacna1eQ61290 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1eQ61290 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.75■□□□□ 0.27
Cacna1eQ61290 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1eQ61290 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1eQ61290 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1eQ61290 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.74■□□□□ 0.27
Cacna1eQ61290 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1eQ61290 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1eQ61290 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1eQ61290 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1eQ61290 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cacna1eQ61290 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.74■□□□□ 0.27
Cacna1eQ61290 Gm28659-201ENSMUST00000188013 759 ntBASIC16.74■□□□□ 0.27
Cacna1eQ61290 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1eQ61290 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1eQ61290 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1eQ61290 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.74■□□□□ 0.27
Cacna1eQ61290 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1eQ61290 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1eQ61290 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.73■□□□□ 0.27
Cacna1eQ61290 Mir5126-201ENSMUST00000175513 77 ntBASIC16.73■□□□□ 0.27
Cacna1eQ61290 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.73■□□□□ 0.27
Cacna1eQ61290 AW822252-206ENSMUST00000208904 237 ntBASIC16.73■□□□□ 0.27
Cacna1eQ61290 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.73■□□□□ 0.27
Cacna1eQ61290 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.73■□□□□ 0.27
Cacna1eQ61290 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1eQ61290 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms