Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hif1aQ61221 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Hif1aQ61221 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hif1aQ61221 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Hif1aQ61221 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hif1aQ61221 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hif1aQ61221 Gm11927-201ENSMUST00000118472 759 ntBASIC17.29■□□□□ 0.36
Hif1aQ61221 Gm13148-201ENSMUST00000118892 745 ntBASIC17.29■□□□□ 0.36
Hif1aQ61221 Gm26524-201ENSMUST00000192339 390 ntBASIC17.29■□□□□ 0.36
Hif1aQ61221 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.29■□□□□ 0.36
Hif1aQ61221 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hif1aQ61221 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hif1aQ61221 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hif1aQ61221 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hif1aQ61221 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hif1aQ61221 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hif1aQ61221 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hif1aQ61221 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.29■□□□□ 0.36
Hif1aQ61221 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hif1aQ61221 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.29■□□□□ 0.36
Hif1aQ61221 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.28■□□□□ 0.36
Hif1aQ61221 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hif1aQ61221 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hif1aQ61221 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.28■□□□□ 0.36
Hif1aQ61221 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hif1aQ61221 Mir6349-201ENSMUST00000184059 97 ntBASIC17.28■□□□□ 0.36
Hif1aQ61221 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hif1aQ61221 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hif1aQ61221 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hif1aQ61221 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hif1aQ61221 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hif1aQ61221 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hif1aQ61221 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hif1aQ61221 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hif1aQ61221 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hif1aQ61221 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hif1aQ61221 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Hif1aQ61221 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hif1aQ61221 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.27■□□□□ 0.36
Hif1aQ61221 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hif1aQ61221 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hif1aQ61221 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hif1aQ61221 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hif1aQ61221 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hif1aQ61221 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hif1aQ61221 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hif1aQ61221 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hif1aQ61221 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hif1aQ61221 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hif1aQ61221 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.27■□□□□ 0.36
Hif1aQ61221 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hif1aQ61221 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Hif1aQ61221 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hif1aQ61221 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Hif1aQ61221 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Hif1aQ61221 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hif1aQ61221 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hif1aQ61221 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hif1aQ61221 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.27■□□□□ 0.35
Hif1aQ61221 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hif1aQ61221 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hif1aQ61221 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hif1aQ61221 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hif1aQ61221 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hif1aQ61221 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hif1aQ61221 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hif1aQ61221 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hif1aQ61221 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hif1aQ61221 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hif1aQ61221 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hif1aQ61221 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hif1aQ61221 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.26■□□□□ 0.35
Hif1aQ61221 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hif1aQ61221 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hif1aQ61221 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Hif1aQ61221 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.25■□□□□ 0.35
Hif1aQ61221 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Hif1aQ61221 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.25■□□□□ 0.35
Hif1aQ61221 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.25■□□□□ 0.35
Hif1aQ61221 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.25■□□□□ 0.35
Hif1aQ61221 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hif1aQ61221 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hif1aQ61221 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hif1aQ61221 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.24■□□□□ 0.35
Hif1aQ61221 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms