Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdf4Q61112 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.36■□□□□ 0.37
Sdf4Q61112 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdf4Q61112 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Sdf4Q61112 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sdf4Q61112 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdf4Q61112 Gm3375-201ENSMUST00000203929 796 ntBASIC17.35■□□□□ 0.37
Sdf4Q61112 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.35■□□□□ 0.37
Sdf4Q61112 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.35■□□□□ 0.37
Sdf4Q61112 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdf4Q61112 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdf4Q61112 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.35■□□□□ 0.37
Sdf4Q61112 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdf4Q61112 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.35■□□□□ 0.37
Sdf4Q61112 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Sdf4Q61112 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sdf4Q61112 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdf4Q61112 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdf4Q61112 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sdf4Q61112 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sdf4Q61112 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.34■□□□□ 0.37
Sdf4Q61112 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdf4Q61112 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.34■□□□□ 0.37
Sdf4Q61112 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sdf4Q61112 Gm7638-201ENSMUST00000121348 967 ntBASIC17.34■□□□□ 0.37
Sdf4Q61112 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.34■□□□□ 0.37
Sdf4Q61112 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdf4Q61112 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdf4Q61112 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sdf4Q61112 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.34■□□□□ 0.37
Sdf4Q61112 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.34■□□□□ 0.37
Sdf4Q61112 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.34■□□□□ 0.37
Sdf4Q61112 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Sdf4Q61112 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.34■□□□□ 0.37
Sdf4Q61112 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.34■□□□□ 0.37
Sdf4Q61112 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdf4Q61112 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdf4Q61112 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdf4Q61112 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdf4Q61112 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sdf4Q61112 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Sdf4Q61112 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sdf4Q61112 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Sdf4Q61112 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Sdf4Q61112 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sdf4Q61112 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdf4Q61112 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdf4Q61112 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sdf4Q61112 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdf4Q61112 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sdf4Q61112 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.33■□□□□ 0.36
Sdf4Q61112 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sdf4Q61112 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.33■□□□□ 0.36
Sdf4Q61112 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.33■□□□□ 0.36
Sdf4Q61112 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdf4Q61112 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.33■□□□□ 0.36
Sdf4Q61112 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdf4Q61112 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.32■□□□□ 0.36
Sdf4Q61112 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sdf4Q61112 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Sdf4Q61112 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Sdf4Q61112 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sdf4Q61112 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sdf4Q61112 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdf4Q61112 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdf4Q61112 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sdf4Q61112 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sdf4Q61112 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sdf4Q61112 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdf4Q61112 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdf4Q61112 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sdf4Q61112 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdf4Q61112 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdf4Q61112 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdf4Q61112 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdf4Q61112 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Sdf4Q61112 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdf4Q61112 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdf4Q61112 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sdf4Q61112 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdf4Q61112 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sdf4Q61112 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdf4Q61112 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Sdf4Q61112 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdf4Q61112 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.31■□□□□ 0.36
Sdf4Q61112 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdf4Q61112 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sdf4Q61112 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdf4Q61112 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sdf4Q61112 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdf4Q61112 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sdf4Q61112 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdf4Q61112 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Sdf4Q61112 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Sdf4Q61112 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdf4Q61112 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Sdf4Q61112 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sdf4Q61112 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms