Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.71■□□□□ 0.11
Foxd3Q61060 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Foxd3Q61060 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Foxd3Q61060 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Foxd3Q61060 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Foxd3Q61060 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.7■□□□□ 0.1
Foxd3Q61060 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Foxd3Q61060 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Foxd3Q61060 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxd3Q61060 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxd3Q61060 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxd3Q61060 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxd3Q61060 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxd3Q61060 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxd3Q61060 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Foxd3Q61060 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.7■□□□□ 0.1
Foxd3Q61060 Gm15565-201ENSMUST00000118890 427 ntBASIC15.7■□□□□ 0.1
Foxd3Q61060 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.7■□□□□ 0.1
Foxd3Q61060 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxd3Q61060 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Foxd3Q61060 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxd3Q61060 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxd3Q61060 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxd3Q61060 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Foxd3Q61060 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxd3Q61060 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxd3Q61060 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.69■□□□□ 0.1
Foxd3Q61060 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxd3Q61060 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxd3Q61060 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxd3Q61060 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.69■□□□□ 0.1
Foxd3Q61060 Gm13401-201ENSMUST00000117074 291 ntBASIC15.69■□□□□ 0.1
Foxd3Q61060 Gm715-201ENSMUST00000117865 831 ntBASIC15.69■□□□□ 0.1
Foxd3Q61060 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
Foxd3Q61060 Gm11643-201ENSMUST00000119578 864 ntBASIC15.69■□□□□ 0.1
Foxd3Q61060 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.69■□□□□ 0.1
Foxd3Q61060 Gm2559-201ENSMUST00000201323 363 ntBASIC15.69■□□□□ 0.1
Foxd3Q61060 Gm44487-201ENSMUST00000205145 325 ntBASIC15.69■□□□□ 0.1
Foxd3Q61060 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Foxd3Q61060 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.69■□□□□ 0.1
Foxd3Q61060 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Foxd3Q61060 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.69■□□□□ 0.1
Foxd3Q61060 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxd3Q61060 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.69■□□□□ 0.1
Foxd3Q61060 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxd3Q61060 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Foxd3Q61060 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Foxd3Q61060 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxd3Q61060 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxd3Q61060 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.68■□□□□ 0.1
Foxd3Q61060 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxd3Q61060 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxd3Q61060 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Foxd3Q61060 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxd3Q61060 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxd3Q61060 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.68■□□□□ 0.1
Foxd3Q61060 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxd3Q61060 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxd3Q61060 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.68■□□□□ 0.1
Foxd3Q61060 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Foxd3Q61060 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.68■□□□□ 0.1
Foxd3Q61060 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.68■□□□□ 0.1
Foxd3Q61060 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxd3Q61060 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Foxd3Q61060 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Foxd3Q61060 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxd3Q61060 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Foxd3Q61060 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxd3Q61060 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Foxd3Q61060 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxd3Q61060 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxd3Q61060 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxd3Q61060 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxd3Q61060 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxd3Q61060 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Foxd3Q61060 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Foxd3Q61060 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxd3Q61060 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Foxd3Q61060 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Foxd3Q61060 Gm6576-201ENSMUST00000169678 883 ntBASIC15.67■□□□□ 0.1
Foxd3Q61060 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.67■□□□□ 0.1
Foxd3Q61060 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Foxd3Q61060 Gm10698-201ENSMUST00000182663 604 ntBASIC15.67■□□□□ 0.1
Foxd3Q61060 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.67■□□□□ 0.1
Foxd3Q61060 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms