Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nr1h4Q60641 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nr1h4Q60641 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.33■□□□□ 0.2
Nr1h4Q60641 Gm13401-201ENSMUST00000117074 291 ntBASIC16.33■□□□□ 0.2
Nr1h4Q60641 Gm11643-201ENSMUST00000119578 864 ntBASIC16.33■□□□□ 0.2
Nr1h4Q60641 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h4Q60641 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h4Q60641 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.33■□□□□ 0.2
Nr1h4Q60641 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.33■□□□□ 0.2
Nr1h4Q60641 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h4Q60641 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h4Q60641 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h4Q60641 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h4Q60641 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h4Q60641 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h4Q60641 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h4Q60641 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nr1h4Q60641 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h4Q60641 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.33■□□□□ 0.2
Nr1h4Q60641 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.33■□□□□ 0.2
Nr1h4Q60641 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1h4Q60641 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Nr1h4Q60641 Gm10849-201ENSMUST00000100397 618 ntBASIC16.32■□□□□ 0.2
Nr1h4Q60641 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h4Q60641 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nr1h4Q60641 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h4Q60641 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nr1h4Q60641 Gm26524-201ENSMUST00000192339 390 ntBASIC16.32■□□□□ 0.2
Nr1h4Q60641 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nr1h4Q60641 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h4Q60641 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h4Q60641 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1h4Q60641 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h4Q60641 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h4Q60641 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h4Q60641 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h4Q60641 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h4Q60641 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nr1h4Q60641 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h4Q60641 Gm11927-201ENSMUST00000118472 759 ntBASIC16.31■□□□□ 0.2
Nr1h4Q60641 Mir6349-201ENSMUST00000184059 97 ntBASIC16.31■□□□□ 0.2
Nr1h4Q60641 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h4Q60641 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nr1h4Q60641 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1h4Q60641 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.31■□□□□ 0.2
Nr1h4Q60641 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.3■□□□□ 0.2
Nr1h4Q60641 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.3■□□□□ 0.2
Nr1h4Q60641 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h4Q60641 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Rab3c-203ENSMUST00000224180 967 ntBASIC16.3■□□□□ 0.2
Nr1h4Q60641 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h4Q60641 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h4Q60641 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h4Q60641 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.28■□□□□ 0.2
Nr1h4Q60641 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h4Q60641 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h4Q60641 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h4Q60641 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h4Q60641 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h4Q60641 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h4Q60641 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.28■□□□□ 0.2
Nr1h4Q60641 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h4Q60641 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h4Q60641 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h4Q60641 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h4Q60641 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h4Q60641 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Nr1h4Q60641 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms