Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atp13a4Q5XF90 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Il3ra-202ENSMUST00000223589 738 ntBASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atp13a4Q5XF90 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atp13a4Q5XF90 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.46■□□□□ 0.55
Atp13a4Q5XF90 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Atp13a4Q5XF90 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atp13a4Q5XF90 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Atp13a4Q5XF90 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp13a4Q5XF90 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp13a4Q5XF90 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp13a4Q5XF90 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp13a4Q5XF90 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.44■□□□□ 0.54
Atp13a4Q5XF90 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Atp13a4Q5XF90 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms