Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim38Q5SZ99 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim38Q5SZ99 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Trim38Q5SZ99 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim38Q5SZ99 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.42
Trim38Q5SZ99 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim38Q5SZ99 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim38Q5SZ99 Mir1199-201ENSMUST00000117015 119 ntBASIC17.7■□□□□ 0.42
Trim38Q5SZ99 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms