Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Gm7367-201ENSMUST00000057611 492 ntBASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Gm10819-201ENSMUST00000099988 561 ntBASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ctc1Q5SUQ9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctc1Q5SUQ9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ctc1Q5SUQ9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctc1Q5SUQ9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctc1Q5SUQ9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ctc1Q5SUQ9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctc1Q5SUQ9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctc1Q5SUQ9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctc1Q5SUQ9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctc1Q5SUQ9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctc1Q5SUQ9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctc1Q5SUQ9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctc1Q5SUQ9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ctc1Q5SUQ9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.09■□□□□ 0.49
Ctc1Q5SUQ9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Ctc1Q5SUQ9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ctc1Q5SUQ9 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.09■□□□□ 0.49
Ctc1Q5SUQ9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Ctc1Q5SUQ9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctc1Q5SUQ9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctc1Q5SUQ9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctc1Q5SUQ9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctc1Q5SUQ9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctc1Q5SUQ9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctc1Q5SUQ9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.09■□□□□ 0.49
Ctc1Q5SUQ9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctc1Q5SUQ9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ctc1Q5SUQ9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ctc1Q5SUQ9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.08■□□□□ 0.49
Ctc1Q5SUQ9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ctc1Q5SUQ9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ctc1Q5SUQ9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ctc1Q5SUQ9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ctc1Q5SUQ9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ctc1Q5SUQ9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ctc1Q5SUQ9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ctc1Q5SUQ9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ctc1Q5SUQ9 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.08■□□□□ 0.48
Ctc1Q5SUQ9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ctc1Q5SUQ9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Ctc1Q5SUQ9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ctc1Q5SUQ9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ctc1Q5SUQ9 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.08■□□□□ 0.48
Ctc1Q5SUQ9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ctc1Q5SUQ9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ctc1Q5SUQ9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms