Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Gm10602-201ENSMUST00000098239 609 ntBASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav7d-3Q5R1I1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav7d-3Q5R1I1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.58□□□□□ -0.39
Trav7d-3Q5R1I1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav7d-3Q5R1I1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Gm15375-201ENSMUST00000119510 849 ntBASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Mtag2-201ENSMUST00000058665 714 ntBASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav7d-3Q5R1I1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms