Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Urb1Q571H0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Urb1Q571H0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Urb1Q571H0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Urb1Q571H0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Urb1Q571H0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.7■□□□□ 0.1
Urb1Q571H0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Urb1Q571H0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Urb1Q571H0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Urb1Q571H0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Urb1Q571H0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Urb1Q571H0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Urb1Q571H0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Urb1Q571H0 Gm6623-201ENSMUST00000173570 544 ntBASIC15.7■□□□□ 0.1
Urb1Q571H0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Urb1Q571H0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Urb1Q571H0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Urb1Q571H0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Urb1Q571H0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Urb1Q571H0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Urb1Q571H0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.69■□□□□ 0.1
Urb1Q571H0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Urb1Q571H0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Urb1Q571H0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Urb1Q571H0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Urb1Q571H0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Urb1Q571H0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Urb1Q571H0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Urb1Q571H0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Urb1Q571H0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Urb1Q571H0 Gm2651-201ENSMUST00000203560 838 ntBASIC15.69■□□□□ 0.1
Urb1Q571H0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.69■□□□□ 0.1
Urb1Q571H0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Urb1Q571H0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Urb1Q571H0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Urb1Q571H0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Urb1Q571H0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Urb1Q571H0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Urb1Q571H0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Urb1Q571H0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Urb1Q571H0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Urb1Q571H0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Urb1Q571H0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.68■□□□□ 0.1
Urb1Q571H0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Urb1Q571H0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Urb1Q571H0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Urb1Q571H0 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.68■□□□□ 0.1
Urb1Q571H0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Urb1Q571H0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Urb1Q571H0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Urb1Q571H0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.68■□□□□ 0.1
Urb1Q571H0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Urb1Q571H0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Urb1Q571H0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Urb1Q571H0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Urb1Q571H0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Urb1Q571H0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Urb1Q571H0 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.67■□□□□ 0.1
Urb1Q571H0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Urb1Q571H0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Urb1Q571H0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Urb1Q571H0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Urb1Q571H0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Urb1Q571H0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Urb1Q571H0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Urb1Q571H0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Urb1Q571H0 Gm11452-201ENSMUST00000122376 690 ntBASIC15.66■□□□□ 0.1
Urb1Q571H0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Urb1Q571H0 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.66■□□□□ 0.1
Urb1Q571H0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Urb1Q571H0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Urb1Q571H0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Urb1Q571H0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Urb1Q571H0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Urb1Q571H0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Urb1Q571H0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Urb1Q571H0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Urb1Q571H0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Urb1Q571H0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Urb1Q571H0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Urb1Q571H0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.66■□□□□ 0.1
Urb1Q571H0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Urb1Q571H0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Urb1Q571H0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Urb1Q571H0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Urb1Q571H0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.66■□□□□ 0.1
Urb1Q571H0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Urb1Q571H0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Urb1Q571H0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.65■□□□□ 0.1
Urb1Q571H0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.65■□□□□ 0.1
Urb1Q571H0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Urb1Q571H0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Urb1Q571H0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Urb1Q571H0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Urb1Q571H0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Urb1Q571H0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Urb1Q571H0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.65■□□□□ 0.1
Urb1Q571H0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.65■□□□□ 0.1
Urb1Q571H0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.65■□□□□ 0.1
Urb1Q571H0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms