Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h1Q4VGL6 Gm9013-201ENSMUST00000132939 882 ntBASIC19.76■□□□□ 0.75
Rc3h1Q4VGL6 Gm29518-201ENSMUST00000190858 372 ntBASIC19.76■□□□□ 0.75
Rc3h1Q4VGL6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h1Q4VGL6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h1Q4VGL6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h1Q4VGL6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rc3h1Q4VGL6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rc3h1Q4VGL6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rc3h1Q4VGL6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rc3h1Q4VGL6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rc3h1Q4VGL6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rc3h1Q4VGL6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rc3h1Q4VGL6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rc3h1Q4VGL6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rc3h1Q4VGL6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rc3h1Q4VGL6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rc3h1Q4VGL6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rc3h1Q4VGL6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rc3h1Q4VGL6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Rc3h1Q4VGL6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rc3h1Q4VGL6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rc3h1Q4VGL6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rc3h1Q4VGL6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Rc3h1Q4VGL6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Rc3h1Q4VGL6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Rc3h1Q4VGL6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rc3h1Q4VGL6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rc3h1Q4VGL6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rc3h1Q4VGL6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rc3h1Q4VGL6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
Rc3h1Q4VGL6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rc3h1Q4VGL6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rc3h1Q4VGL6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rc3h1Q4VGL6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Gm37722-201ENSMUST00000193757 208 ntBASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rc3h1Q4VGL6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Gm7284-201ENSMUST00000131667 944 ntBASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Gm17808-201ENSMUST00000200859 894 ntBASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.72■□□□□ 0.75
Rc3h1Q4VGL6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rc3h1Q4VGL6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms