Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trim80Q3V061 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim80Q3V061 Gm22325-201ENSMUST00000158904 308 ntBASIC17.69■□□□□ 0.42
Trim80Q3V061 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim80Q3V061 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim80Q3V061 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim80Q3V061 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim80Q3V061 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim80Q3V061 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim80Q3V061 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim80Q3V061 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim80Q3V061 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim80Q3V061 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim80Q3V061 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim80Q3V061 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim80Q3V061 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim80Q3V061 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim80Q3V061 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.68■□□□□ 0.42
Trim80Q3V061 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim80Q3V061 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim80Q3V061 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim80Q3V061 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim80Q3V061 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.68■□□□□ 0.42
Trim80Q3V061 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim80Q3V061 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Trim80Q3V061 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Trim80Q3V061 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim80Q3V061 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim80Q3V061 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim80Q3V061 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim80Q3V061 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim80Q3V061 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim80Q3V061 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Trim80Q3V061 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim80Q3V061 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim80Q3V061 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim80Q3V061 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
Trim80Q3V061 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.67■□□□□ 0.42
Trim80Q3V061 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Trim80Q3V061 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.67■□□□□ 0.42
Trim80Q3V061 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim80Q3V061 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim80Q3V061 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim80Q3V061 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim80Q3V061 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trim80Q3V061 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim80Q3V061 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim80Q3V061 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Trim80Q3V061 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim80Q3V061 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim80Q3V061 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim80Q3V061 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim80Q3V061 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim80Q3V061 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim80Q3V061 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim80Q3V061 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim80Q3V061 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim80Q3V061 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim80Q3V061 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim80Q3V061 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim80Q3V061 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim80Q3V061 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim80Q3V061 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim80Q3V061 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim80Q3V061 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim80Q3V061 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim80Q3V061 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim80Q3V061 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim80Q3V061 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.65■□□□□ 0.42
Trim80Q3V061 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim80Q3V061 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.65■□□□□ 0.42
Trim80Q3V061 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim80Q3V061 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim80Q3V061 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim80Q3V061 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trim80Q3V061 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trim80Q3V061 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim80Q3V061 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim80Q3V061 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim80Q3V061 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim80Q3V061 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim80Q3V061 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim80Q3V061 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim80Q3V061 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms