Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Gm27463-201ENSMUST00000183569 57 ntBASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Zfp560Q3URI6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Zfp560Q3URI6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Zfp560Q3URI6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Zfp560Q3URI6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zfp560Q3URI6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Zfp560Q3URI6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zfp560Q3URI6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.14■□□□□ 0.33
Zfp560Q3URI6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zfp560Q3URI6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zfp560Q3URI6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.14■□□□□ 0.33
Zfp560Q3URI6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.14■□□□□ 0.33
Zfp560Q3URI6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Zfp560Q3URI6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zfp560Q3URI6 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.14■□□□□ 0.33
Zfp560Q3URI6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Zfp560Q3URI6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.14■□□□□ 0.33
Zfp560Q3URI6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zfp560Q3URI6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zfp560Q3URI6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Gm7791-201ENSMUST00000219066 539 ntBASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zfp560Q3URI6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Zfp560Q3URI6 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Il3ra-202ENSMUST00000223589 738 ntBASIC17.11■□□□□ 0.33
Zfp560Q3URI6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms