Protein–RNA interactions for Protein: Q3UNW5

Tfcp2l1, Transcription factor CP2-like protein 1, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tfcp2l1Q3UNW5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tfcp2l1Q3UNW5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tfcp2l1Q3UNW5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tfcp2l1Q3UNW5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tfcp2l1Q3UNW5 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Gm27525-201ENSMUST00000184465 107 ntBASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tfcp2l1Q3UNW5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tfcp2l1Q3UNW5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tfcp2l1Q3UNW5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tfcp2l1Q3UNW5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tfcp2l1Q3UNW5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tfcp2l1Q3UNW5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Tfcp2l1Q3UNW5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.71■□□□□ 0.75
Tfcp2l1Q3UNW5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Tfcp2l1Q3UNW5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tfcp2l1Q3UNW5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tfcp2l1Q3UNW5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tfcp2l1Q3UNW5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tfcp2l1Q3UNW5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tfcp2l1Q3UNW5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tfcp2l1Q3UNW5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tfcp2l1Q3UNW5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tfcp2l1Q3UNW5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tfcp2l1Q3UNW5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tfcp2l1Q3UNW5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Tfcp2l1Q3UNW5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Tfcp2l1Q3UNW5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tfcp2l1Q3UNW5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.7■□□□□ 0.74
Tfcp2l1Q3UNW5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tfcp2l1Q3UNW5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tfcp2l1Q3UNW5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tfcp2l1Q3UNW5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tfcp2l1Q3UNW5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.69■□□□□ 0.74
Tfcp2l1Q3UNW5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tfcp2l1Q3UNW5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tfcp2l1Q3UNW5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tfcp2l1Q3UNW5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tfcp2l1Q3UNW5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tfcp2l1Q3UNW5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.68■□□□□ 0.74
Tfcp2l1Q3UNW5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tfcp2l1Q3UNW5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.68■□□□□ 0.74
Tfcp2l1Q3UNW5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tfcp2l1Q3UNW5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tfcp2l1Q3UNW5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.68■□□□□ 0.74
Tfcp2l1Q3UNW5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.68■□□□□ 0.74
Tfcp2l1Q3UNW5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.68■□□□□ 0.74
Tfcp2l1Q3UNW5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tfcp2l1Q3UNW5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Tfcp2l1Q3UNW5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.68■□□□□ 0.74
Tfcp2l1Q3UNW5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Tfcp2l1Q3UNW5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tfcp2l1Q3UNW5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tfcp2l1Q3UNW5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tfcp2l1Q3UNW5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tfcp2l1Q3UNW5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tfcp2l1Q3UNW5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.67■□□□□ 0.74
Tfcp2l1Q3UNW5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tfcp2l1Q3UNW5 Mir8112-201ENSMUST00000184382 131 ntBASIC19.67■□□□□ 0.74
Tfcp2l1Q3UNW5 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.67■□□□□ 0.74
Tfcp2l1Q3UNW5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms