Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smcr8Q3UMB5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smcr8Q3UMB5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smcr8Q3UMB5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smcr8Q3UMB5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.39■□□□□ 0.53
Smcr8Q3UMB5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smcr8Q3UMB5 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Gm27389-201ENSMUST00000183622 195 ntBASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smcr8Q3UMB5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
Smcr8Q3UMB5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smcr8Q3UMB5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smcr8Q3UMB5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smcr8Q3UMB5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.37■□□□□ 0.53
Smcr8Q3UMB5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
Smcr8Q3UMB5 Gm17661-201ENSMUST00000170317 270 ntBASIC18.37■□□□□ 0.53
Smcr8Q3UMB5 Gm33142-201ENSMUST00000193913 867 ntBASIC18.37■□□□□ 0.53
Smcr8Q3UMB5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smcr8Q3UMB5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Smcr8Q3UMB5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smcr8Q3UMB5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smcr8Q3UMB5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smcr8Q3UMB5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smcr8Q3UMB5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Smcr8Q3UMB5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smcr8Q3UMB5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smcr8Q3UMB5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.36■□□□□ 0.53
Smcr8Q3UMB5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smcr8Q3UMB5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smcr8Q3UMB5 Gm7213-201ENSMUST00000215977 950 ntBASIC18.36■□□□□ 0.53
Smcr8Q3UMB5 Gm21559-201ENSMUST00000220638 855 ntBASIC18.36■□□□□ 0.53
Smcr8Q3UMB5 Gm8587-201ENSMUST00000076538 843 ntBASIC18.36■□□□□ 0.53
Smcr8Q3UMB5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smcr8Q3UMB5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smcr8Q3UMB5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Smcr8Q3UMB5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smcr8Q3UMB5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
Smcr8Q3UMB5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smcr8Q3UMB5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Gm25016-201ENSMUST00000158399 131 ntBASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Mir1668-201ENSMUST00000184114 107 ntBASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Mir8112-201ENSMUST00000184382 131 ntBASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smcr8Q3UMB5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms