Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Gm45328-201ENSMUST00000210942 917 ntBASIC20.39■□□□□ 0.85
Spg7Q3ULF4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Spg7Q3ULF4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Spg7Q3ULF4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Spg7Q3ULF4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Spg7Q3ULF4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Spg7Q3ULF4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
Spg7Q3ULF4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Spg7Q3ULF4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Spg7Q3ULF4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Spg7Q3ULF4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Spg7Q3ULF4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Spg7Q3ULF4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Spg7Q3ULF4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Spg7Q3ULF4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Spg7Q3ULF4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Spg7Q3ULF4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Spg7Q3ULF4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Spg7Q3ULF4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Spg7Q3ULF4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Spg7Q3ULF4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Spg7Q3ULF4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.37■□□□□ 0.85
Spg7Q3ULF4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.37■□□□□ 0.85
Spg7Q3ULF4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Spg7Q3ULF4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Spg7Q3ULF4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.37■□□□□ 0.85
Spg7Q3ULF4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Spg7Q3ULF4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Spg7Q3ULF4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Spg7Q3ULF4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Spg7Q3ULF4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Spg7Q3ULF4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Spg7Q3ULF4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Spg7Q3ULF4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Spg7Q3ULF4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Spg7Q3ULF4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Spg7Q3ULF4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Spg7Q3ULF4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Spg7Q3ULF4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Spg7Q3ULF4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Spg7Q3ULF4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.36■□□□□ 0.85
Spg7Q3ULF4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.36■□□□□ 0.85
Spg7Q3ULF4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Spg7Q3ULF4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Spg7Q3ULF4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Spg7Q3ULF4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Spg7Q3ULF4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Spg7Q3ULF4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Spg7Q3ULF4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Spg7Q3ULF4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Spg7Q3ULF4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Spg7Q3ULF4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Spg7Q3ULF4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Spg7Q3ULF4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Spg7Q3ULF4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Spg7Q3ULF4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Spg7Q3ULF4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Spg7Q3ULF4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Spg7Q3ULF4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Spg7Q3ULF4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Spg7Q3ULF4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Spg7Q3ULF4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Spg7Q3ULF4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Spg7Q3ULF4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Spg7Q3ULF4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Spg7Q3ULF4 Gm27742-201ENSMUST00000184667 60 ntBASIC20.34■□□□□ 0.85
Spg7Q3ULF4 Gm18669-201ENSMUST00000216049 778 ntBASIC20.34■□□□□ 0.85
Spg7Q3ULF4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.34■□□□□ 0.85
Spg7Q3ULF4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Spg7Q3ULF4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Spg7Q3ULF4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Spg7Q3ULF4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Spg7Q3ULF4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Spg7Q3ULF4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Spg7Q3ULF4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Spg7Q3ULF4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Spg7Q3ULF4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Spg7Q3ULF4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Spg7Q3ULF4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Spg7Q3ULF4 Gm11336-201ENSMUST00000118168 334 ntBASIC20.33■□□□□ 0.85
Spg7Q3ULF4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Spg7Q3ULF4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Spg7Q3ULF4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Spg7Q3ULF4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Spg7Q3ULF4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Spg7Q3ULF4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Spg7Q3ULF4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Spg7Q3ULF4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Spg7Q3ULF4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Spg7Q3ULF4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Spg7Q3ULF4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.33■□□□□ 0.84
Spg7Q3ULF4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.33■□□□□ 0.84
Spg7Q3ULF4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Spg7Q3ULF4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Spg7Q3ULF4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Spg7Q3ULF4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms