Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col5a2Q3U962 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col5a2Q3U962 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Gm5264-201ENSMUST00000190584 848 ntBASIC20.3■□□□□ 0.84
Col5a2Q3U962 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col5a2Q3U962 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Gm15165-201ENSMUST00000118140 502 ntBASIC20.3■□□□□ 0.84
Col5a2Q3U962 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col5a2Q3U962 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.3■□□□□ 0.84
Col5a2Q3U962 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col5a2Q3U962 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.29■□□□□ 0.84
Col5a2Q3U962 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col5a2Q3U962 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Col5a2Q3U962 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.29■□□□□ 0.84
Col5a2Q3U962 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col5a2Q3U962 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Col5a2Q3U962 Psmb5-202ENSMUST00000227257 622 ntBASIC20.29■□□□□ 0.84
Col5a2Q3U962 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col5a2Q3U962 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col5a2Q3U962 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col5a2Q3U962 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col5a2Q3U962 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Col5a2Q3U962 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.28■□□□□ 0.84
Col5a2Q3U962 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col5a2Q3U962 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col5a2Q3U962 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col5a2Q3U962 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.28■□□□□ 0.84
Col5a2Q3U962 Gm27867-201ENSMUST00000184778 125 ntBASIC20.28■□□□□ 0.84
Col5a2Q3U962 Gm29707-201ENSMUST00000196325 491 ntBASIC20.28■□□□□ 0.84
Col5a2Q3U962 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Col5a2Q3U962 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col5a2Q3U962 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col5a2Q3U962 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col5a2Q3U962 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col5a2Q3U962 Gm23935-201ENSMUST00000102303 57 ntBASIC20.27■□□□□ 0.84
Col5a2Q3U962 Gm24270-201ENSMUST00000102326 57 ntBASIC20.27■□□□□ 0.84
Col5a2Q3U962 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
Col5a2Q3U962 Gm24245-201ENSMUST00000157318 57 ntBASIC20.27■□□□□ 0.84
Col5a2Q3U962 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col5a2Q3U962 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.27■□□□□ 0.84
Col5a2Q3U962 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col5a2Q3U962 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col5a2Q3U962 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.27■□□□□ 0.84
Col5a2Q3U962 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.27■□□□□ 0.84
Col5a2Q3U962 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.27■□□□□ 0.84
Col5a2Q3U962 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col5a2Q3U962 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Col5a2Q3U962 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col5a2Q3U962 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col5a2Q3U962 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Col5a2Q3U962 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col5a2Q3U962 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col5a2Q3U962 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Col5a2Q3U962 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col5a2Q3U962 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Col5a2Q3U962 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Gm43575-201ENSMUST00000196420 516 ntBASIC20.26■□□□□ 0.83
Col5a2Q3U962 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col5a2Q3U962 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Col5a2Q3U962 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col5a2Q3U962 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.25■□□□□ 0.83
Col5a2Q3U962 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col5a2Q3U962 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Col5a2Q3U962 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.25■□□□□ 0.83
Col5a2Q3U962 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col5a2Q3U962 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col5a2Q3U962 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col5a2Q3U962 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col5a2Q3U962 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms