Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp25Q3U435 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp25Q3U435 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Mmp25Q3U435 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp25Q3U435 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Gm13836-201ENSMUST00000121159 501 ntBASIC16.09■□□□□ 0.17
Mmp25Q3U435 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.09■□□□□ 0.17
Mmp25Q3U435 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Mmp25Q3U435 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp25Q3U435 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mmp25Q3U435 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
Mmp25Q3U435 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mmp25Q3U435 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mmp25Q3U435 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.08■□□□□ 0.17
Mmp25Q3U435 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mmp25Q3U435 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
Mmp25Q3U435 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.08■□□□□ 0.16
Mmp25Q3U435 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mmp25Q3U435 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mmp25Q3U435 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mmp25Q3U435 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.08■□□□□ 0.16
Mmp25Q3U435 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mmp25Q3U435 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.08■□□□□ 0.16
Mmp25Q3U435 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.08■□□□□ 0.16
Mmp25Q3U435 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mmp25Q3U435 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Mmp25Q3U435 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.08■□□□□ 0.16
Mmp25Q3U435 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mmp25Q3U435 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Mmp25Q3U435 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mmp25Q3U435 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mmp25Q3U435 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mmp25Q3U435 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mmp25Q3U435 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Gm7370-201ENSMUST00000219471 767 ntBASIC16.07■□□□□ 0.16
Mmp25Q3U435 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.07■□□□□ 0.16
Mmp25Q3U435 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Mmp25Q3U435 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.07■□□□□ 0.16
Mmp25Q3U435 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.06■□□□□ 0.16
Mmp25Q3U435 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp25Q3U435 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp25Q3U435 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp25Q3U435 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Mmp25Q3U435 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp25Q3U435 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp25Q3U435 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Mmp25Q3U435 Gm10231-201ENSMUST00000181584 441 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms