Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Khdc4Q3TCX3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc4Q3TCX3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc4Q3TCX3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc4Q3TCX3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc4Q3TCX3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc4Q3TCX3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Khdc4Q3TCX3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Khdc4Q3TCX3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.27■□□□□ 0.2
Khdc4Q3TCX3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Khdc4Q3TCX3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Khdc4Q3TCX3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Khdc4Q3TCX3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc4Q3TCX3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Khdc4Q3TCX3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Khdc4Q3TCX3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Khdc4Q3TCX3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.27■□□□□ 0.19
Khdc4Q3TCX3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Khdc4Q3TCX3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Gm45058-201ENSMUST00000205810 766 ntBASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Khdc4Q3TCX3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Gm23634-201ENSMUST00000175071 91 ntBASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Mir5130-201ENSMUST00000175160 84 ntBASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Gm2274-201ENSMUST00000184539 609 ntBASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Khdc4Q3TCX3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Gm4974-201ENSMUST00000209974 875 ntBASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Khdc4Q3TCX3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms