Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Nhej1Q3KNJ2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nhej1Q3KNJ2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Nhej1Q3KNJ2 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.23■□□□□ 0.51
Nhej1Q3KNJ2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nhej1Q3KNJ2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nhej1Q3KNJ2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nhej1Q3KNJ2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Nhej1Q3KNJ2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nhej1Q3KNJ2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nhej1Q3KNJ2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Nhej1Q3KNJ2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nhej1Q3KNJ2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.23■□□□□ 0.51
Nhej1Q3KNJ2 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.23■□□□□ 0.51
Nhej1Q3KNJ2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nhej1Q3KNJ2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nhej1Q3KNJ2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nhej1Q3KNJ2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nhej1Q3KNJ2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Gm11249-201ENSMUST00000117071 859 ntBASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Gm12896-201ENSMUST00000118430 226 ntBASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Gm37179-201ENSMUST00000194862 823 ntBASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nhej1Q3KNJ2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nhej1Q3KNJ2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nhej1Q3KNJ2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nhej1Q3KNJ2 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.21■□□□□ 0.51
Nhej1Q3KNJ2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nhej1Q3KNJ2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Nhej1Q3KNJ2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nhej1Q3KNJ2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nhej1Q3KNJ2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nhej1Q3KNJ2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nhej1Q3KNJ2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nhej1Q3KNJ2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nhej1Q3KNJ2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nhej1Q3KNJ2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Nhej1Q3KNJ2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms