Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ebf1Q07802 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf1Q07802 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ebf1Q07802 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ebf1Q07802 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.3■□□□□ 0.36
Ebf1Q07802 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf1Q07802 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.3■□□□□ 0.36
Ebf1Q07802 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf1Q07802 Gm28033-201ENSMUST00000184224 96 ntBASIC17.3■□□□□ 0.36
Ebf1Q07802 Gm17807-201ENSMUST00000186869 298 ntBASIC17.3■□□□□ 0.36
Ebf1Q07802 Gm29791-202ENSMUST00000207888 369 ntBASIC17.3■□□□□ 0.36
Ebf1Q07802 Gm9731-201ENSMUST00000209480 747 ntBASIC17.3■□□□□ 0.36
Ebf1Q07802 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf1Q07802 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf1Q07802 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf1Q07802 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ebf1Q07802 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf1Q07802 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf1Q07802 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.29■□□□□ 0.36
Ebf1Q07802 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.29■□□□□ 0.36
Ebf1Q07802 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf1Q07802 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf1Q07802 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.29■□□□□ 0.36
Ebf1Q07802 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf1Q07802 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf1Q07802 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.29■□□□□ 0.36
Ebf1Q07802 Gm37025-201ENSMUST00000195159 829 ntBASIC17.29■□□□□ 0.36
Ebf1Q07802 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.29■□□□□ 0.36
Ebf1Q07802 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.29■□□□□ 0.36
Ebf1Q07802 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf1Q07802 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Ebf1Q07802 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf1Q07802 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Ebf1Q07802 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.28■□□□□ 0.36
Ebf1Q07802 Gm11355-201ENSMUST00000121120 306 ntBASIC17.28■□□□□ 0.36
Ebf1Q07802 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.28■□□□□ 0.36
Ebf1Q07802 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 Gm7213-201ENSMUST00000215977 950 ntBASIC17.28■□□□□ 0.36
Ebf1Q07802 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ebf1Q07802 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ebf1Q07802 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf1Q07802 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf1Q07802 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf1Q07802 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.27■□□□□ 0.36
Ebf1Q07802 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ebf1Q07802 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.27■□□□□ 0.36
Ebf1Q07802 Gm17808-201ENSMUST00000200859 894 ntBASIC17.27■□□□□ 0.36
Ebf1Q07802 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf1Q07802 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf1Q07802 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ebf1Q07802 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ebf1Q07802 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
Ebf1Q07802 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf1Q07802 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ebf1Q07802 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ebf1Q07802 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ebf1Q07802 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ebf1Q07802 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ebf1Q07802 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Ebf1Q07802 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ebf1Q07802 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf1Q07802 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf1Q07802 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf1Q07802 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf1Q07802 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf1Q07802 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
Ebf1Q07802 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.26■□□□□ 0.35
Ebf1Q07802 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ebf1Q07802 Gm18669-201ENSMUST00000216049 778 ntBASIC17.26■□□□□ 0.35
Ebf1Q07802 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.26■□□□□ 0.35
Ebf1Q07802 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf1Q07802 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf1Q07802 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ebf1Q07802 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf1Q07802 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf1Q07802 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf1Q07802 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ebf1Q07802 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf1Q07802 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf1Q07802 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ebf1Q07802 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.25■□□□□ 0.35
Ebf1Q07802 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ebf1Q07802 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf1Q07802 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf1Q07802 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Ebf1Q07802 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms