Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cdx4Q07424 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdx4Q07424 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cdx4Q07424 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Cdx4Q07424 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdx4Q07424 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdx4Q07424 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cdx4Q07424 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx4Q07424 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.24□□□□□ -0.29
Cdx4Q07424 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx4Q07424 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx4Q07424 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx4Q07424 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx4Q07424 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx4Q07424 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdx4Q07424 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdx4Q07424 Gm15375-201ENSMUST00000119510 849 ntBASIC13.23□□□□□ -0.29
Cdx4Q07424 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cdx4Q07424 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx4Q07424 Gm37055-201ENSMUST00000191866 133 ntBASIC13.23□□□□□ -0.29
Cdx4Q07424 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.23□□□□□ -0.29
Cdx4Q07424 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.23□□□□□ -0.29
Cdx4Q07424 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.23□□□□□ -0.29
Cdx4Q07424 Mtag2-201ENSMUST00000058665 714 ntBASIC13.23□□□□□ -0.29
Cdx4Q07424 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cdx4Q07424 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx4Q07424 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx4Q07424 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx4Q07424 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx4Q07424 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx4Q07424 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx4Q07424 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx4Q07424 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx4Q07424 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdx4Q07424 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdx4Q07424 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdx4Q07424 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdx4Q07424 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdx4Q07424 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Cdx4Q07424 Gm13836-201ENSMUST00000121159 501 ntBASIC13.22□□□□□ -0.29
Cdx4Q07424 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.22□□□□□ -0.29
Cdx4Q07424 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdx4Q07424 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.22□□□□□ -0.29
Cdx4Q07424 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdx4Q07424 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdx4Q07424 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Cdx4Q07424 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Cdx4Q07424 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Cdx4Q07424 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdx4Q07424 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cdx4Q07424 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdx4Q07424 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdx4Q07424 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdx4Q07424 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdx4Q07424 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.21□□□□□ -0.29
Cdx4Q07424 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx4Q07424 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cdx4Q07424 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx4Q07424 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx4Q07424 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx4Q07424 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx4Q07424 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx4Q07424 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx4Q07424 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx4Q07424 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdx4Q07424 Gm11643-201ENSMUST00000119578 864 ntBASIC13.21□□□□□ -0.29
Cdx4Q07424 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdx4Q07424 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx4Q07424 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx4Q07424 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.21□□□□□ -0.29
Cdx4Q07424 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx4Q07424 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.21□□□□□ -0.3
Cdx4Q07424 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdx4Q07424 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdx4Q07424 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdx4Q07424 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdx4Q07424 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx4Q07424 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx4Q07424 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.2□□□□□ -0.3
Cdx4Q07424 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Cdx4Q07424 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Cdx4Q07424 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx4Q07424 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Cdx4Q07424 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cdx4Q07424 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx4Q07424 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx4Q07424 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx4Q07424 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx4Q07424 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx4Q07424 Gm12382-201ENSMUST00000122005 922 ntBASIC13.2□□□□□ -0.3
Cdx4Q07424 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms