Protein–RNA interactions for Protein: Q03404

Tff2, Trefoil factor 2, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff2Q03404 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tff2Q03404 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tff2Q03404 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tff2Q03404 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tff2Q03404 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tff2Q03404 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tff2Q03404 Phf7-203ENSMUST00000226565 1971 ntBASIC18.83■□□□□ 0.61
Tff2Q03404 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Tff2Q03404 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tff2Q03404 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tff2Q03404 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Tff2Q03404 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.83■□□□□ 0.6
Tff2Q03404 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tff2Q03404 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tff2Q03404 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tff2Q03404 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Tff2Q03404 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
Tff2Q03404 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tff2Q03404 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tff2Q03404 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.82■□□□□ 0.6
Tff2Q03404 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tff2Q03404 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tff2Q03404 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.82■□□□□ 0.6
Tff2Q03404 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tff2Q03404 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tff2Q03404 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tff2Q03404 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tff2Q03404 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tff2Q03404 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Tff2Q03404 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Tff2Q03404 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tff2Q03404 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.82■□□□□ 0.6
Tff2Q03404 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tff2Q03404 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tff2Q03404 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tff2Q03404 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tff2Q03404 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tff2Q03404 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tff2Q03404 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tff2Q03404 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tff2Q03404 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tff2Q03404 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.81■□□□□ 0.6
Tff2Q03404 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.81■□□□□ 0.6
Tff2Q03404 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.81■□□□□ 0.6
Tff2Q03404 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tff2Q03404 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tff2Q03404 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.81■□□□□ 0.6
Tff2Q03404 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Tff2Q03404 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tff2Q03404 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tff2Q03404 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tff2Q03404 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tff2Q03404 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tff2Q03404 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tff2Q03404 Gm13186-201ENSMUST00000118031 316 ntBASIC18.8■□□□□ 0.6
Tff2Q03404 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.8■□□□□ 0.6
Tff2Q03404 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.8■□□□□ 0.6
Tff2Q03404 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tff2Q03404 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tff2Q03404 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tff2Q03404 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Tff2Q03404 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tff2Q03404 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tff2Q03404 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tff2Q03404 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tff2Q03404 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tff2Q03404 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tff2Q03404 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tff2Q03404 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tff2Q03404 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.79■□□□□ 0.6
Tff2Q03404 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tff2Q03404 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tff2Q03404 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tff2Q03404 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tff2Q03404 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.79■□□□□ 0.6
Tff2Q03404 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tff2Q03404 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tff2Q03404 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Tff2Q03404 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tff2Q03404 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tff2Q03404 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tff2Q03404 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tff2Q03404 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tff2Q03404 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tff2Q03404 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms