Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.39□□□□□ -0.11
SgcaP82350 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SgcaP82350 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.38□□□□□ -0.11
SgcaP82350 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SgcaP82350 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcaP82350 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcaP82350 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SgcaP82350 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcaP82350 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SgcaP82350 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SgcaP82350 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcaP82350 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SgcaP82350 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.38□□□□□ -0.11
SgcaP82350 Gm43060-201ENSMUST00000200621 289 ntBASIC14.38□□□□□ -0.11
SgcaP82350 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcaP82350 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SgcaP82350 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.38□□□□□ -0.11
SgcaP82350 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcaP82350 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SgcaP82350 Reep4-203ENSMUST00000226563 1444 ntBASIC14.38□□□□□ -0.11
SgcaP82350 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcaP82350 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcaP82350 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcaP82350 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcaP82350 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcaP82350 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SgcaP82350 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SgcaP82350 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.37□□□□□ -0.11
SgcaP82350 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Gm6139-201ENSMUST00000079261 882 ntBASIC14.37□□□□□ -0.11
SgcaP82350 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.37□□□□□ -0.11
SgcaP82350 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
SgcaP82350 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SgcaP82350 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SgcaP82350 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SgcaP82350 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcaP82350 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SgcaP82350 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SgcaP82350 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcaP82350 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SgcaP82350 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcaP82350 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.36□□□□□ -0.11
SgcaP82350 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcaP82350 Gm43017-201ENSMUST00000198296 752 ntBASIC14.36□□□□□ -0.11
SgcaP82350 Gm45417-201ENSMUST00000209533 758 ntBASIC14.36□□□□□ -0.11
SgcaP82350 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.36□□□□□ -0.11
SgcaP82350 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SgcaP82350 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SgcaP82350 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcaP82350 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcaP82350 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcaP82350 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcaP82350 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcaP82350 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.36□□□□□ -0.11
SgcaP82350 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SgcaP82350 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SgcaP82350 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.36□□□□□ -0.11
SgcaP82350 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcaP82350 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcaP82350 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcaP82350 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcaP82350 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcaP82350 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcaP82350 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SgcaP82350 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SgcaP82350 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcaP82350 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcaP82350 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcaP82350 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.35□□□□□ -0.11
SgcaP82350 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SgcaP82350 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcaP82350 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcaP82350 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SgcaP82350 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SgcaP82350 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SgcaP82350 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms