Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SgcbP82349 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcbP82349 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcbP82349 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SgcbP82349 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcbP82349 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcbP82349 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcbP82349 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SgcbP82349 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcbP82349 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcbP82349 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SgcbP82349 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SgcbP82349 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SgcbP82349 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SgcbP82349 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SgcbP82349 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.27■□□□□ 0.04
SgcbP82349 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SgcbP82349 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.27■□□□□ 0.04
SgcbP82349 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.27■□□□□ 0.04
SgcbP82349 Gm11539-201ENSMUST00000119837 557 ntBASIC15.27■□□□□ 0.04
SgcbP82349 Gm13436-201ENSMUST00000120418 567 ntBASIC15.27■□□□□ 0.04
SgcbP82349 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SgcbP82349 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.27■□□□□ 0.04
SgcbP82349 Gm9731-201ENSMUST00000209480 747 ntBASIC15.27■□□□□ 0.04
SgcbP82349 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SgcbP82349 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SgcbP82349 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SgcbP82349 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SgcbP82349 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SgcbP82349 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SgcbP82349 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SgcbP82349 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SgcbP82349 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SgcbP82349 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SgcbP82349 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.26■□□□□ 0.03
SgcbP82349 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SgcbP82349 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.26■□□□□ 0.03
SgcbP82349 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
SgcbP82349 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SgcbP82349 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SgcbP82349 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
SgcbP82349 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcbP82349 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SgcbP82349 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcbP82349 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SgcbP82349 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SgcbP82349 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.25■□□□□ 0.03
SgcbP82349 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SgcbP82349 Gm44487-201ENSMUST00000205145 325 ntBASIC15.25■□□□□ 0.03
SgcbP82349 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SgcbP82349 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcbP82349 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.25■□□□□ 0.03
SgcbP82349 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcbP82349 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SgcbP82349 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
SgcbP82349 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcbP82349 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.25■□□□□ 0.03
SgcbP82349 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcbP82349 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SgcbP82349 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcbP82349 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcbP82349 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcbP82349 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SgcbP82349 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.24■□□□□ 0.03
SgcbP82349 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SgcbP82349 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Gm6433-201ENSMUST00000118634 875 ntBASIC15.24■□□□□ 0.03
SgcbP82349 Gm13559-201ENSMUST00000120476 863 ntBASIC15.24■□□□□ 0.03
SgcbP82349 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.24■□□□□ 0.03
SgcbP82349 Gm2274-201ENSMUST00000184539 609 ntBASIC15.24■□□□□ 0.03
SgcbP82349 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SgcbP82349 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SgcbP82349 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms