Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.01■□□□□ 0.15
Six5P70178 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Six5P70178 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Six5P70178 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Six5P70178 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Six5P70178 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Six5P70178 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Six5P70178 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Six5P70178 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16■□□□□ 0.15
Six5P70178 Gm42900-201ENSMUST00000197184 2167 ntBASIC16■□□□□ 0.15
Six5P70178 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Six5P70178 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Six5P70178 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Six5P70178 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16■□□□□ 0.15
Six5P70178 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16■□□□□ 0.15
Six5P70178 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16■□□□□ 0.15
Six5P70178 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16■□□□□ 0.15
Six5P70178 Otx2os1-204ENSMUST00000227221 751 ntBASIC16■□□□□ 0.15
Six5P70178 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Six5P70178 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Six5P70178 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16■□□□□ 0.15
Six5P70178 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Six5P70178 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16■□□□□ 0.15
Six5P70178 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16■□□□□ 0.15
Six5P70178 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16■□□□□ 0.15
Six5P70178 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Six5P70178 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Six5P70178 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Six5P70178 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.99■□□□□ 0.15
Six5P70178 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Six5P70178 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Six5P70178 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Six5P70178 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Six5P70178 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.99■□□□□ 0.15
Six5P70178 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Six5P70178 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Six5P70178 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Six5P70178 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Six5P70178 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Six5P70178 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Six5P70178 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Six5P70178 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.99■□□□□ 0.15
Six5P70178 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Six5P70178 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Six5P70178 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Six5P70178 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Six5P70178 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Six5P70178 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Six5P70178 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Six5P70178 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Six5P70178 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Six5P70178 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Six5P70178 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Six5P70178 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Six5P70178 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Six5P70178 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Six5P70178 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Six5P70178 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Six5P70178 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Six5P70178 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Six5P70178 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Six5P70178 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Six5P70178 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Six5P70178 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Six5P70178 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Six5P70178 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Six5P70178 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Six5P70178 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Six5P70178 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Six5P70178 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Six5P70178 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Six5P70178 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Six5P70178 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.97■□□□□ 0.15
Six5P70178 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.97■□□□□ 0.15
Six5P70178 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Six5P70178 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Six5P70178 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Six5P70178 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Six5P70178 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.97■□□□□ 0.15
Six5P70178 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Six5P70178 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Six5P70178 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Six5P70178 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Six5P70178 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Six5P70178 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Six5P70178 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Six5P70178 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Six5P70178 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Six5P70178 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.96■□□□□ 0.15
Six5P70178 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Six5P70178 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms