Protein–RNA interactions for Protein: P68433

Hist1h3a, Histone H3.1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3aP68433 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Hist1h3aP68433 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Gm22240-201ENSMUST00000175225 82 ntBASIC14.9□□□□□ -0.02
Hist1h3aP68433 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hist1h3aP68433 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.89□□□□□ -0.03
Hist1h3aP68433 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hist1h3aP68433 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Gm12085-201ENSMUST00000119263 940 ntBASIC14.89□□□□□ -0.03
Hist1h3aP68433 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Gm9731-201ENSMUST00000209480 747 ntBASIC14.89□□□□□ -0.03
Hist1h3aP68433 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Hist1h3aP68433 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Gm715-201ENSMUST00000117865 831 ntBASIC14.88□□□□□ -0.03
Hist1h3aP68433 Gm7638-201ENSMUST00000121348 967 ntBASIC14.88□□□□□ -0.03
Hist1h3aP68433 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Timm23-208ENSMUST00000226683 750 ntBASIC14.88□□□□□ -0.03
Hist1h3aP68433 Odf3b-204ENSMUST00000227834 930 ntBASIC14.88□□□□□ -0.03
Hist1h3aP68433 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Hist1h3aP68433 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.87□□□□□ -0.03
Hist1h3aP68433 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Il3ra-202ENSMUST00000223589 738 ntBASIC14.87□□□□□ -0.03
Hist1h3aP68433 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.87□□□□□ -0.03
Hist1h3aP68433 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hist1h3aP68433 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist1h3aP68433 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hist1h3aP68433 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist1h3aP68433 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms