Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ThraP63058 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
ThraP63058 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ThraP63058 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ThraP63058 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ThraP63058 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ThraP63058 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ThraP63058 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.32■□□□□ 0.36
ThraP63058 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ThraP63058 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ThraP63058 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.32■□□□□ 0.36
ThraP63058 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ThraP63058 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ThraP63058 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ThraP63058 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ThraP63058 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ThraP63058 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.31■□□□□ 0.36
ThraP63058 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ThraP63058 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ThraP63058 Timm23-208ENSMUST00000226683 750 ntBASIC17.31■□□□□ 0.36
ThraP63058 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ThraP63058 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ThraP63058 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ThraP63058 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ThraP63058 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ThraP63058 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ThraP63058 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.31■□□□□ 0.36
ThraP63058 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.31■□□□□ 0.36
ThraP63058 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ThraP63058 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ThraP63058 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ThraP63058 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ThraP63058 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ThraP63058 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ThraP63058 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ThraP63058 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ThraP63058 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.3■□□□□ 0.36
ThraP63058 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ThraP63058 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ThraP63058 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.3■□□□□ 0.36
ThraP63058 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ThraP63058 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ThraP63058 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ThraP63058 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.3■□□□□ 0.36
ThraP63058 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ThraP63058 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ThraP63058 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.29■□□□□ 0.36
ThraP63058 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ThraP63058 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ThraP63058 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ThraP63058 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
ThraP63058 Gm3375-201ENSMUST00000203929 796 ntBASIC17.29■□□□□ 0.36
ThraP63058 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ThraP63058 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.29■□□□□ 0.36
ThraP63058 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ThraP63058 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ThraP63058 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ThraP63058 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ThraP63058 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ThraP63058 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ThraP63058 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ThraP63058 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ThraP63058 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ThraP63058 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.28■□□□□ 0.36
ThraP63058 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ThraP63058 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ThraP63058 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ThraP63058 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ThraP63058 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ThraP63058 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ThraP63058 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ThraP63058 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ThraP63058 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ThraP63058 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ThraP63058 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ThraP63058 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ThraP63058 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ThraP63058 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ThraP63058 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ThraP63058 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ThraP63058 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ThraP63058 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.27■□□□□ 0.36
ThraP63058 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ThraP63058 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ThraP63058 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ThraP63058 Idnk-204ENSMUST00000226010 1898 ntBASIC17.27■□□□□ 0.36
ThraP63058 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.27■□□□□ 0.36
ThraP63058 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ThraP63058 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.27■□□□□ 0.36
ThraP63058 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ThraP63058 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ThraP63058 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.27■□□□□ 0.36
ThraP63058 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.27■□□□□ 0.36
ThraP63058 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ThraP63058 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ThraP63058 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ThraP63058 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
ThraP63058 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ThraP63058 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ThraP63058 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms