Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Lhx1P63006 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.82■□□□□ 0.28
Lhx1P63006 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx1P63006 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Lhx1P63006 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx1P63006 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx1P63006 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx1P63006 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Lhx1P63006 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx1P63006 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lhx1P63006 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx1P63006 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx1P63006 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx1P63006 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx1P63006 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Lhx1P63006 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx1P63006 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx1P63006 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx1P63006 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx1P63006 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.81■□□□□ 0.28
Lhx1P63006 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lhx1P63006 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx1P63006 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx1P63006 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx1P63006 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx1P63006 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lhx1P63006 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx1P63006 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.8■□□□□ 0.28
Lhx1P63006 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx1P63006 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx1P63006 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx1P63006 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx1P63006 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx1P63006 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Lhx1P63006 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx1P63006 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.8■□□□□ 0.28
Lhx1P63006 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.8■□□□□ 0.28
Lhx1P63006 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Lhx1P63006 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Gm21559-201ENSMUST00000220638 855 ntBASIC16.79■□□□□ 0.28
Lhx1P63006 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Lhx1P63006 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lhx1P63006 Gm8587-201ENSMUST00000076538 843 ntBASIC16.79■□□□□ 0.28
Lhx1P63006 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Lhx1P63006 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.79■□□□□ 0.28
Lhx1P63006 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx1P63006 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx1P63006 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Lhx1P63006 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx1P63006 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx1P63006 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx1P63006 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Lhx1P63006 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.78■□□□□ 0.28
Lhx1P63006 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Lhx1P63006 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.78■□□□□ 0.28
Lhx1P63006 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx1P63006 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx1P63006 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.78■□□□□ 0.28
Lhx1P63006 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.78■□□□□ 0.28
Lhx1P63006 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx1P63006 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx1P63006 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx1P63006 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lhx1P63006 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx1P63006 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx1P63006 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Lhx1P63006 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx1P63006 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx1P63006 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Lhx1P63006 Gm23634-201ENSMUST00000175071 91 ntBASIC16.77■□□□□ 0.28
Lhx1P63006 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx1P63006 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.77■□□□□ 0.28
Lhx1P63006 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Lhx1P63006 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.77■□□□□ 0.28
Lhx1P63006 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lhx1P63006 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lhx1P63006 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lhx1P63006 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lhx1P63006 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lhx1P63006 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Lhx1P63006 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Lhx1P63006 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lhx1P63006 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.76■□□□□ 0.27
Lhx1P63006 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx1P63006 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms