Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pfn1P62962 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.33□□□□□ -0.28
Pfn1P62962 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Pfn1P62962 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.32□□□□□ -0.28
Pfn1P62962 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pfn1P62962 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.32□□□□□ -0.28
Pfn1P62962 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.32□□□□□ -0.28
Pfn1P62962 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pfn1P62962 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Gm13146-201ENSMUST00000118508 780 ntBASIC13.32□□□□□ -0.28
Pfn1P62962 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.32□□□□□ -0.28
Pfn1P62962 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pfn1P62962 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.32□□□□□ -0.28
Pfn1P62962 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pfn1P62962 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pfn1P62962 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.31□□□□□ -0.28
Pfn1P62962 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.31□□□□□ -0.28
Pfn1P62962 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfn1P62962 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfn1P62962 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfn1P62962 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfn1P62962 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfn1P62962 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pfn1P62962 Gm13534-201ENSMUST00000121169 513 ntBASIC13.31□□□□□ -0.28
Pfn1P62962 Gm45417-201ENSMUST00000209533 758 ntBASIC13.31□□□□□ -0.28
Pfn1P62962 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.31□□□□□ -0.28
Pfn1P62962 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Pfn1P62962 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfn1P62962 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.31□□□□□ -0.28
Pfn1P62962 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfn1P62962 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfn1P62962 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfn1P62962 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.31□□□□□ -0.28
Pfn1P62962 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pfn1P62962 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfn1P62962 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfn1P62962 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.31□□□□□ -0.28
Pfn1P62962 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.31□□□□□ -0.28
Pfn1P62962 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pfn1P62962 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pfn1P62962 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pfn1P62962 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pfn1P62962 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfn1P62962 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfn1P62962 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfn1P62962 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.3□□□□□ -0.28
Pfn1P62962 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfn1P62962 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Pfn1P62962 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfn1P62962 Gm9988-201ENSMUST00000069786 435 ntBASIC13.3□□□□□ -0.28
Pfn1P62962 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfn1P62962 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfn1P62962 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfn1P62962 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pfn1P62962 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfn1P62962 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pfn1P62962 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pfn1P62962 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfn1P62962 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfn1P62962 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.29□□□□□ -0.28
Pfn1P62962 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfn1P62962 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfn1P62962 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfn1P62962 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfn1P62962 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfn1P62962 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfn1P62962 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfn1P62962 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfn1P62962 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Pfn1P62962 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.29□□□□□ -0.28
Pfn1P62962 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfn1P62962 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfn1P62962 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfn1P62962 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Pfn1P62962 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pfn1P62962 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pfn1P62962 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfn1P62962 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfn1P62962 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms