Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.52■□□□□ 0.4
Ybx1P62960 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ybx1P62960 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.52■□□□□ 0.39
Ybx1P62960 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ybx1P62960 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ybx1P62960 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ybx1P62960 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ybx1P62960 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ybx1P62960 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ybx1P62960 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ybx1P62960 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ybx1P62960 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ybx1P62960 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ybx1P62960 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ybx1P62960 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ybx1P62960 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ybx1P62960 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.51■□□□□ 0.39
Ybx1P62960 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.51■□□□□ 0.39
Ybx1P62960 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ybx1P62960 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.51■□□□□ 0.39
Ybx1P62960 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ybx1P62960 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ybx1P62960 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.51■□□□□ 0.39
Ybx1P62960 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ybx1P62960 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ybx1P62960 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.5■□□□□ 0.39
Ybx1P62960 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ybx1P62960 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ybx1P62960 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ybx1P62960 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Ybx1P62960 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ybx1P62960 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ybx1P62960 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ybx1P62960 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ybx1P62960 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ybx1P62960 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ybx1P62960 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Ybx1P62960 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ybx1P62960 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Ybx1P62960 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ybx1P62960 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.5■□□□□ 0.39
Ybx1P62960 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ybx1P62960 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.49■□□□□ 0.39
Ybx1P62960 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ybx1P62960 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ybx1P62960 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ybx1P62960 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ybx1P62960 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ybx1P62960 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ybx1P62960 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.49■□□□□ 0.39
Ybx1P62960 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ybx1P62960 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.49■□□□□ 0.39
Ybx1P62960 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.49■□□□□ 0.39
Ybx1P62960 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ybx1P62960 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ybx1P62960 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.49■□□□□ 0.39
Ybx1P62960 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ybx1P62960 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ybx1P62960 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ybx1P62960 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ybx1P62960 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ybx1P62960 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ybx1P62960 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ybx1P62960 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ybx1P62960 Gm24589-201ENSMUST00000116692 94 ntBASIC17.48■□□□□ 0.39
Ybx1P62960 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ybx1P62960 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ybx1P62960 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ybx1P62960 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ybx1P62960 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ybx1P62960 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ybx1P62960 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.48■□□□□ 0.39
Ybx1P62960 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ybx1P62960 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ybx1P62960 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ybx1P62960 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ybx1P62960 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
Ybx1P62960 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ybx1P62960 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.47■□□□□ 0.39
Ybx1P62960 Gm18115-201ENSMUST00000221209 621 ntBASIC17.47■□□□□ 0.39
Ybx1P62960 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ybx1P62960 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ybx1P62960 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ybx1P62960 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ybx1P62960 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms