Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch1P62046 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Lrch1P62046 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch1P62046 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.13■□□□□ 0.81
Lrch1P62046 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.13■□□□□ 0.81
Lrch1P62046 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch1P62046 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
Lrch1P62046 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch1P62046 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.13■□□□□ 0.81
Lrch1P62046 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Lrch1P62046 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch1P62046 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch1P62046 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.13■□□□□ 0.81
Lrch1P62046 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch1P62046 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch1P62046 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch1P62046 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch1P62046 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch1P62046 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.13■□□□□ 0.81
Lrch1P62046 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Lrch1P62046 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrch1P62046 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrch1P62046 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lrch1P62046 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrch1P62046 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrch1P62046 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrch1P62046 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrch1P62046 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Lrch1P62046 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrch1P62046 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.12■□□□□ 0.81
Lrch1P62046 Gm11779-201ENSMUST00000118541 368 ntBASIC20.12■□□□□ 0.81
Lrch1P62046 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lrch1P62046 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrch1P62046 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrch1P62046 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Lrch1P62046 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lrch1P62046 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.12■□□□□ 0.81
Lrch1P62046 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lrch1P62046 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lrch1P62046 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lrch1P62046 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.11■□□□□ 0.81
Lrch1P62046 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.11■□□□□ 0.81
Lrch1P62046 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.11■□□□□ 0.81
Lrch1P62046 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.11■□□□□ 0.81
Lrch1P62046 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lrch1P62046 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lrch1P62046 Phf7-203ENSMUST00000226565 1971 ntBASIC20.11■□□□□ 0.81
Lrch1P62046 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Lrch1P62046 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lrch1P62046 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lrch1P62046 Idnk-204ENSMUST00000226010 1898 ntBASIC20.1■□□□□ 0.81
Lrch1P62046 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.1■□□□□ 0.81
Lrch1P62046 Gm5264-201ENSMUST00000190584 848 ntBASIC20.1■□□□□ 0.81
Lrch1P62046 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.1■□□□□ 0.81
Lrch1P62046 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.1■□□□□ 0.81
Lrch1P62046 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrch1P62046 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrch1P62046 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lrch1P62046 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrch1P62046 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrch1P62046 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Lrch1P62046 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrch1P62046 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lrch1P62046 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lrch1P62046 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrch1P62046 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrch1P62046 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrch1P62046 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrch1P62046 Gm27702-201ENSMUST00000184512 56 ntBASIC20.09■□□□□ 0.81
Lrch1P62046 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lrch1P62046 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrch1P62046 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lrch1P62046 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lrch1P62046 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Lrch1P62046 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lrch1P62046 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Lrch1P62046 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lrch1P62046 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lrch1P62046 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lrch1P62046 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Lrch1P62046 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lrch1P62046 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lrch1P62046 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lrch1P62046 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.08■□□□□ 0.8
Lrch1P62046 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lrch1P62046 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lrch1P62046 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.07■□□□□ 0.8
Lrch1P62046 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lrch1P62046 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lrch1P62046 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Lrch1P62046 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lrch1P62046 Mir5126-201ENSMUST00000175513 77 ntBASIC20.07■□□□□ 0.8
Lrch1P62046 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.07■□□□□ 0.8
Lrch1P62046 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.07■□□□□ 0.8
Lrch1P62046 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lrch1P62046 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lrch1P62046 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lrch1P62046 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lrch1P62046 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lrch1P62046 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms