Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lmo4P61969 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lmo4P61969 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lmo4P61969 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lmo4P61969 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lmo4P61969 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lmo4P61969 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lmo4P61969 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lmo4P61969 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.83□□□□□ -0.2
Lmo4P61969 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lmo4P61969 Gm27357-201ENSMUST00000183754 135 ntBASIC13.83□□□□□ -0.2
Lmo4P61969 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lmo4P61969 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lmo4P61969 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.83□□□□□ -0.2
Lmo4P61969 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lmo4P61969 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lmo4P61969 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lmo4P61969 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lmo4P61969 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lmo4P61969 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lmo4P61969 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lmo4P61969 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lmo4P61969 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Lmo4P61969 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.82□□□□□ -0.2
Lmo4P61969 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Mir3081-201ENSMUST00000175305 84 ntBASIC13.82□□□□□ -0.2
Lmo4P61969 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Lmo4P61969 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lmo4P61969 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lmo4P61969 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lmo4P61969 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lmo4P61969 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lmo4P61969 Phf7-203ENSMUST00000226565 1971 ntBASIC13.82□□□□□ -0.2
Lmo4P61969 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lmo4P61969 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Lmo4P61969 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lmo4P61969 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lmo4P61969 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lmo4P61969 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lmo4P61969 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.81□□□□□ -0.2
Lmo4P61969 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lmo4P61969 Olfr129-201ENSMUST00000122318 993 ntBASIC13.81□□□□□ -0.2
Lmo4P61969 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.81□□□□□ -0.2
Lmo4P61969 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Lmo4P61969 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lmo4P61969 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lmo4P61969 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lmo4P61969 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Lmo4P61969 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lmo4P61969 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lmo4P61969 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Lmo4P61969 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC13.81□□□□□ -0.2
Lmo4P61969 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lmo4P61969 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Lmo4P61969 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.8□□□□□ -0.2
Lmo4P61969 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Gm8969-201ENSMUST00000199694 526 ntBASIC13.8□□□□□ -0.2
Lmo4P61969 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Lmo4P61969 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.8□□□□□ -0.2
Lmo4P61969 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Lmo4P61969 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lmo4P61969 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms