Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubgcp3P58854 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tubgcp3P58854 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.48■□□□□ 0.39
Tubgcp3P58854 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tubgcp3P58854 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.48■□□□□ 0.39
Tubgcp3P58854 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp3P58854 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.48■□□□□ 0.39
Tubgcp3P58854 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp3P58854 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tubgcp3P58854 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.47■□□□□ 0.39
Tubgcp3P58854 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp3P58854 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp3P58854 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp3P58854 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp3P58854 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp3P58854 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp3P58854 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp3P58854 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tubgcp3P58854 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.47■□□□□ 0.39
Tubgcp3P58854 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tubgcp3P58854 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp3P58854 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp3P58854 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp3P58854 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp3P58854 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Tubgcp3P58854 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp3P58854 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp3P58854 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp3P58854 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubgcp3P58854 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Tubgcp3P58854 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Tubgcp3P58854 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Tubgcp3P58854 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Gm24841-201ENSMUST00000158676 357 ntBASIC17.45■□□□□ 0.38
Tubgcp3P58854 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tubgcp3P58854 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp3P58854 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp3P58854 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.44■□□□□ 0.38
Tubgcp3P58854 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp3P58854 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp3P58854 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.44■□□□□ 0.38
Tubgcp3P58854 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp3P58854 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp3P58854 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp3P58854 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.44■□□□□ 0.38
Tubgcp3P58854 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp3P58854 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp3P58854 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.44■□□□□ 0.38
Tubgcp3P58854 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp3P58854 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Tubgcp3P58854 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubgcp3P58854 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubgcp3P58854 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tubgcp3P58854 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubgcp3P58854 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubgcp3P58854 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Tubgcp3P58854 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Tubgcp3P58854 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubgcp3P58854 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tubgcp3P58854 Gm8520-201ENSMUST00000186517 868 ntBASIC17.43■□□□□ 0.38
Tubgcp3P58854 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubgcp3P58854 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.43■□□□□ 0.38
Tubgcp3P58854 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms