Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Msh6P54276 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Msh6P54276 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Msh6P54276 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh6P54276 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh6P54276 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh6P54276 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Msh6P54276 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Msh6P54276 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh6P54276 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh6P54276 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Msh6P54276 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.7■■□□□ 1.06
Msh6P54276 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Msh6P54276 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh6P54276 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh6P54276 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh6P54276 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Msh6P54276 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh6P54276 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh6P54276 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.69■■□□□ 1.06
Msh6P54276 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh6P54276 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh6P54276 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh6P54276 Gm27459-201ENSMUST00000184860 107 ntBASIC21.69■■□□□ 1.06
Msh6P54276 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh6P54276 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Msh6P54276 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Msh6P54276 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh6P54276 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Msh6P54276 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Msh6P54276 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh6P54276 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Msh6P54276 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Msh6P54276 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.68■■□□□ 1.06
Msh6P54276 Tfap2a-209ENSMUST00000225180 1828 ntBASIC21.68■■□□□ 1.06
Msh6P54276 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh6P54276 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Msh6P54276 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Msh6P54276 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh6P54276 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.68■■□□□ 1.06
Msh6P54276 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh6P54276 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Msh6P54276 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Msh6P54276 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.68■■□□□ 1.06
Msh6P54276 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Msh6P54276 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Msh6P54276 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh6P54276 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh6P54276 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh6P54276 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Msh6P54276 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh6P54276 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh6P54276 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Msh6P54276 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh6P54276 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh6P54276 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.66■■□□□ 1.06
Msh6P54276 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh6P54276 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Msh6P54276 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC21.66■■□□□ 1.06
Msh6P54276 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Msh6P54276 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC21.66■■□□□ 1.06
Msh6P54276 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.66■■□□□ 1.06
Msh6P54276 Gm28659-201ENSMUST00000188013 759 ntBASIC21.66■■□□□ 1.06
Msh6P54276 AW822252-206ENSMUST00000208904 237 ntBASIC21.66■■□□□ 1.06
Msh6P54276 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh6P54276 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh6P54276 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh6P54276 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Msh6P54276 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh6P54276 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Msh6P54276 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh6P54276 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh6P54276 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC21.66■■□□□ 1.06
Msh6P54276 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Msh6P54276 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Msh6P54276 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Msh6P54276 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Msh6P54276 Gm6443-201ENSMUST00000203599 874 ntBASIC21.65■■□□□ 1.06
Msh6P54276 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC21.65■■□□□ 1.06
Msh6P54276 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.65■■□□□ 1.06
Msh6P54276 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.65■■□□□ 1.06
Msh6P54276 Gm43808-201ENSMUST00000202534 2065 ntBASIC21.65■■□□□ 1.06
Msh6P54276 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Msh6P54276 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Msh6P54276 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Msh6P54276 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Msh6P54276 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Msh6P54276 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.64■■□□□ 1.06
Msh6P54276 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.64■■□□□ 1.06
Msh6P54276 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.64■■□□□ 1.06
Msh6P54276 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Msh6P54276 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Msh6P54276 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Msh6P54276 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Msh6P54276 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Msh6P54276 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Msh6P54276 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Msh6P54276 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Msh6P54276 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Msh6P54276 Gm13884-201ENSMUST00000118103 829 ntBASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms