Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx3P50481 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx3P50481 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx3P50481 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx3P50481 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx3P50481 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lhx3P50481 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx3P50481 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.34■□□□□ 0.37
Lhx3P50481 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx3P50481 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx3P50481 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Lhx3P50481 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.34■□□□□ 0.37
Lhx3P50481 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.34■□□□□ 0.37
Lhx3P50481 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.34■□□□□ 0.37
Lhx3P50481 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx3P50481 Gm22697-201ENSMUST00000175194 63 ntBASIC17.34■□□□□ 0.37
Lhx3P50481 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Lhx3P50481 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx3P50481 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx3P50481 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx3P50481 Gm18101-201ENSMUST00000215769 548 ntBASIC17.34■□□□□ 0.37
Lhx3P50481 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.34■□□□□ 0.37
Lhx3P50481 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Lhx3P50481 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Lhx3P50481 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx3P50481 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx3P50481 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx3P50481 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx3P50481 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lhx3P50481 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lhx3P50481 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Lhx3P50481 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lhx3P50481 Actl10-202ENSMUST00000226583 1501 ntBASIC17.33■□□□□ 0.37
Lhx3P50481 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.33■□□□□ 0.37
Lhx3P50481 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
Lhx3P50481 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx3P50481 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx3P50481 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx3P50481 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Lhx3P50481 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.33■□□□□ 0.36
Lhx3P50481 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx3P50481 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
Lhx3P50481 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx3P50481 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.33■□□□□ 0.36
Lhx3P50481 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lhx3P50481 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.32■□□□□ 0.36
Lhx3P50481 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.32■□□□□ 0.36
Lhx3P50481 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Lhx3P50481 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lhx3P50481 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx3P50481 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx3P50481 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx3P50481 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx3P50481 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.31■□□□□ 0.36
Lhx3P50481 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Lhx3P50481 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx3P50481 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx3P50481 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Lhx3P50481 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx3P50481 Gm10013-201ENSMUST00000106074 672 ntBASIC17.31■□□□□ 0.36
Lhx3P50481 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.31■□□□□ 0.36
Lhx3P50481 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx3P50481 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx3P50481 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.31■□□□□ 0.36
Lhx3P50481 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx3P50481 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.31■□□□□ 0.36
Lhx3P50481 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Lhx3P50481 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx3P50481 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx3P50481 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx3P50481 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lhx3P50481 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx3P50481 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.3■□□□□ 0.36
Lhx3P50481 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx3P50481 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx3P50481 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx3P50481 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx3P50481 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Lhx3P50481 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Lhx3P50481 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lhx3P50481 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx3P50481 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lhx3P50481 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms