Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.23□□□□□ -0.13
Nkx2-1P50220 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-1P50220 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Gm18284-201ENSMUST00000172604 624 ntBASIC14.22□□□□□ -0.13
Nkx2-1P50220 Gm10033-202ENSMUST00000211874 928 ntBASIC14.22□□□□□ -0.13
Nkx2-1P50220 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.22□□□□□ -0.13
Nkx2-1P50220 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-1P50220 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.22□□□□□ -0.13
Nkx2-1P50220 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-1P50220 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-1P50220 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nkx2-1P50220 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-1P50220 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nkx2-1P50220 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-1P50220 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-1P50220 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-1P50220 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-1P50220 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-1P50220 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-1P50220 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-1P50220 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-1P50220 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.21□□□□□ -0.13
Nkx2-1P50220 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-1P50220 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-1P50220 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-1P50220 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-1P50220 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-1P50220 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-1P50220 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
Nkx2-1P50220 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-1P50220 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.19□□□□□ -0.14
Nkx2-1P50220 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Gm10418-201ENSMUST00000100943 576 ntBASIC14.19□□□□□ -0.14
Nkx2-1P50220 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-1P50220 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-1P50220 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms