Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hnf4aP49698 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.58■□□□□ 0.24
Hnf4aP49698 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hnf4aP49698 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hnf4aP49698 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hnf4aP49698 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Hnf4aP49698 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.57■□□□□ 0.24
Hnf4aP49698 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hnf4aP49698 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Hnf4aP49698 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hnf4aP49698 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hnf4aP49698 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hnf4aP49698 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hnf4aP49698 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hnf4aP49698 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hnf4aP49698 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hnf4aP49698 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Hnf4aP49698 Gm13168-201ENSMUST00000121771 632 ntBASIC16.57■□□□□ 0.24
Hnf4aP49698 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.57■□□□□ 0.24
Hnf4aP49698 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Hnf4aP49698 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hnf4aP49698 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hnf4aP49698 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hnf4aP49698 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.57■□□□□ 0.24
Hnf4aP49698 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hnf4aP49698 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hnf4aP49698 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Hnf4aP49698 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.56■□□□□ 0.24
Hnf4aP49698 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hnf4aP49698 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.56■□□□□ 0.24
Hnf4aP49698 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.56■□□□□ 0.24
Hnf4aP49698 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Hnf4aP49698 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Gm24841-201ENSMUST00000158676 357 ntBASIC16.56■□□□□ 0.24
Hnf4aP49698 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hnf4aP49698 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.56■□□□□ 0.24
Hnf4aP49698 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hnf4aP49698 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Hnf4aP49698 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Hnf4aP49698 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Hnf4aP49698 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.55■□□□□ 0.24
Hnf4aP49698 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.55■□□□□ 0.24
Hnf4aP49698 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Hnf4aP49698 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.55■□□□□ 0.24
Hnf4aP49698 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hnf4aP49698 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hnf4aP49698 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hnf4aP49698 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Hnf4aP49698 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hnf4aP49698 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hnf4aP49698 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.54■□□□□ 0.24
Hnf4aP49698 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hnf4aP49698 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hnf4aP49698 Gm8520-201ENSMUST00000186517 868 ntBASIC16.54■□□□□ 0.24
Hnf4aP49698 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hnf4aP49698 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hnf4aP49698 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.54■□□□□ 0.24
Hnf4aP49698 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.54■□□□□ 0.24
Hnf4aP49698 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hnf4aP49698 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hnf4aP49698 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hnf4aP49698 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hnf4aP49698 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hnf4aP49698 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hnf4aP49698 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms