Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.23■□□□□ 0.67
Brca1P48754 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brca1P48754 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Brca1P48754 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brca1P48754 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.22■□□□□ 0.67
Brca1P48754 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Brca1P48754 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brca1P48754 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brca1P48754 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brca1P48754 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brca1P48754 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brca1P48754 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brca1P48754 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brca1P48754 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brca1P48754 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brca1P48754 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Brca1P48754 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brca1P48754 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brca1P48754 Gm6296-201ENSMUST00000222599 943 ntBASIC19.21■□□□□ 0.67
Brca1P48754 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brca1P48754 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brca1P48754 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.21■□□□□ 0.67
Brca1P48754 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brca1P48754 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Brca1P48754 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brca1P48754 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Brca1P48754 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Brca1P48754 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.21■□□□□ 0.67
Brca1P48754 Gm43575-201ENSMUST00000196420 516 ntBASIC19.21■□□□□ 0.67
Brca1P48754 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brca1P48754 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brca1P48754 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.21■□□□□ 0.67
Brca1P48754 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brca1P48754 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brca1P48754 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brca1P48754 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
Brca1P48754 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.66
Brca1P48754 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca1P48754 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca1P48754 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca1P48754 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca1P48754 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca1P48754 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca1P48754 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Brca1P48754 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.2■□□□□ 0.66
Brca1P48754 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.2■□□□□ 0.66
Brca1P48754 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.2■□□□□ 0.66
Brca1P48754 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca1P48754 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Brca1P48754 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca1P48754 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca1P48754 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Brca1P48754 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca1P48754 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brca1P48754 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Brca1P48754 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.19■□□□□ 0.66
Brca1P48754 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brca1P48754 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brca1P48754 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brca1P48754 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Brca1P48754 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.19■□□□□ 0.66
Brca1P48754 Gm29707-201ENSMUST00000196325 491 ntBASIC19.19■□□□□ 0.66
Brca1P48754 Gm6376-201ENSMUST00000209407 580 ntBASIC19.19■□□□□ 0.66
Brca1P48754 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Brca1P48754 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.19■□□□□ 0.66
Brca1P48754 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brca1P48754 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brca1P48754 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brca1P48754 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Brca1P48754 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brca1P48754 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Brca1P48754 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brca1P48754 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Brca1P48754 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Brca1P48754 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.18■□□□□ 0.66
Brca1P48754 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Brca1P48754 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Brca1P48754 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Brca1P48754 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brca1P48754 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Brca1P48754 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brca1P48754 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brca1P48754 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Brca1P48754 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brca1P48754 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.18■□□□□ 0.66
Brca1P48754 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brca1P48754 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Brca1P48754 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Brca1P48754 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brca1P48754 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Brca1P48754 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Brca1P48754 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.18■□□□□ 0.66
Brca1P48754 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Brca1P48754 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Brca1P48754 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brca1P48754 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Brca1P48754 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brca1P48754 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brca1P48754 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Brca1P48754 Gm7862-201ENSMUST00000121461 292 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms