Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx1P48377 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rfx1P48377 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx1P48377 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx1P48377 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
Rfx1P48377 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx1P48377 Gm26571-201ENSMUST00000181399 666 ntBASIC20.47■□□□□ 0.87
Rfx1P48377 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx1P48377 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Rfx1P48377 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx1P48377 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx1P48377 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rfx1P48377 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx1P48377 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx1P48377 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx1P48377 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rfx1P48377 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx1P48377 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx1P48377 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx1P48377 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
Rfx1P48377 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx1P48377 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx1P48377 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.46■□□□□ 0.87
Rfx1P48377 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx1P48377 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx1P48377 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx1P48377 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx1P48377 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.46■□□□□ 0.87
Rfx1P48377 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.45■□□□□ 0.86
Rfx1P48377 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx1P48377 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rfx1P48377 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rfx1P48377 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx1P48377 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx1P48377 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx1P48377 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx1P48377 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.45■□□□□ 0.86
Rfx1P48377 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Rfx1P48377 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.45■□□□□ 0.86
Rfx1P48377 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.45■□□□□ 0.86
Rfx1P48377 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx1P48377 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx1P48377 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx1P48377 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx1P48377 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx1P48377 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rfx1P48377 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx1P48377 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx1P48377 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx1P48377 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx1P48377 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.44■□□□□ 0.86
Rfx1P48377 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx1P48377 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx1P48377 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx1P48377 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx1P48377 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Rfx1P48377 Gm7290-201ENSMUST00000104990 617 ntBASIC20.44■□□□□ 0.86
Rfx1P48377 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx1P48377 Gm11927-201ENSMUST00000118472 759 ntBASIC20.44■□□□□ 0.86
Rfx1P48377 Gm12918-201ENSMUST00000120234 636 ntBASIC20.44■□□□□ 0.86
Rfx1P48377 Gm15710-201ENSMUST00000121821 636 ntBASIC20.44■□□□□ 0.86
Rfx1P48377 Gm5075-201ENSMUST00000196916 622 ntBASIC20.44■□□□□ 0.86
Rfx1P48377 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.44■□□□□ 0.86
Rfx1P48377 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx1P48377 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.44■□□□□ 0.86
Rfx1P48377 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.44■□□□□ 0.86
Rfx1P48377 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.44■□□□□ 0.86
Rfx1P48377 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rfx1P48377 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx1P48377 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rfx1P48377 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.43■□□□□ 0.86
Rfx1P48377 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx1P48377 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC20.43■□□□□ 0.86
Rfx1P48377 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.43■□□□□ 0.86
Rfx1P48377 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx1P48377 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx1P48377 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.43■□□□□ 0.86
Rfx1P48377 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rfx1P48377 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Rfx1P48377 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx1P48377 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx1P48377 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.43■□□□□ 0.86
Rfx1P48377 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx1P48377 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx1P48377 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx1P48377 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx1P48377 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx1P48377 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.42■□□□□ 0.86
Rfx1P48377 Dancr-204ENSMUST00000132389 2347 ntBASIC20.42■□□□□ 0.86
Rfx1P48377 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx1P48377 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.42■□□□□ 0.86
Rfx1P48377 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx1P48377 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx1P48377 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.42■□□□□ 0.86
Rfx1P48377 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rfx1P48377 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.42■□□□□ 0.86
Rfx1P48377 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rfx1P48377 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.42■□□□□ 0.86
Rfx1P48377 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.42■□□□□ 0.86
Rfx1P48377 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms