Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh2P43247 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh2P43247 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh2P43247 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh2P43247 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh2P43247 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh2P43247 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.63■□□□□ 0.41
Msh2P43247 Gm13158-201ENSMUST00000122007 736 ntBASIC17.63■□□□□ 0.41
Msh2P43247 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh2P43247 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh2P43247 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh2P43247 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh2P43247 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh2P43247 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Msh2P43247 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh2P43247 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh2P43247 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.62■□□□□ 0.41
Msh2P43247 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Msh2P43247 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh2P43247 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Msh2P43247 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.62■□□□□ 0.41
Msh2P43247 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.62■□□□□ 0.41
Msh2P43247 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.62■□□□□ 0.41
Msh2P43247 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Msh2P43247 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh2P43247 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.62■□□□□ 0.41
Msh2P43247 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh2P43247 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh2P43247 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Msh2P43247 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh2P43247 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh2P43247 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh2P43247 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Msh2P43247 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Msh2P43247 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh2P43247 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Gm13168-201ENSMUST00000121771 632 ntBASIC17.61■□□□□ 0.41
Msh2P43247 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Msh2P43247 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh2P43247 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh2P43247 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh2P43247 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Msh2P43247 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Msh2P43247 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Msh2P43247 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Msh2P43247 Gm8520-201ENSMUST00000186517 868 ntBASIC17.6■□□□□ 0.41
Msh2P43247 Gm18666-201ENSMUST00000190039 958 ntBASIC17.6■□□□□ 0.41
Msh2P43247 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Msh2P43247 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Msh2P43247 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.6■□□□□ 0.41
Msh2P43247 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh2P43247 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.59■□□□□ 0.41
Msh2P43247 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh2P43247 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh2P43247 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh2P43247 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh2P43247 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh2P43247 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh2P43247 Gm5643-201ENSMUST00000117081 966 ntBASIC17.59■□□□□ 0.41
Msh2P43247 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Msh2P43247 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.59■□□□□ 0.41
Msh2P43247 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Msh2P43247 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Msh2P43247 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Msh2P43247 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Msh2P43247 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Msh2P43247 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Msh2P43247 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Msh2P43247 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Msh2P43247 Gm10138-203ENSMUST00000206952 366 ntBASIC17.58■□□□□ 0.4
Msh2P43247 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Msh2P43247 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Msh2P43247 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Msh2P43247 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Msh2P43247 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Msh2P43247 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Msh2P43247 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Msh2P43247 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.57■□□□□ 0.4
Msh2P43247 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms