Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.69■□□□□ 0.1
Nkx2-2P42586 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Gm5417-201ENSMUST00000079706 384 ntBASIC15.69■□□□□ 0.1
Nkx2-2P42586 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx2-2P42586 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Gm27463-201ENSMUST00000183569 57 ntBASIC15.68■□□□□ 0.1
Nkx2-2P42586 Gm37055-201ENSMUST00000191866 133 ntBASIC15.68■□□□□ 0.1
Nkx2-2P42586 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.68■□□□□ 0.1
Nkx2-2P42586 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.68■□□□□ 0.1
Nkx2-2P42586 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.68■□□□□ 0.1
Nkx2-2P42586 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-2P42586 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx2-2P42586 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Gm27000-201ENSMUST00000182943 842 ntBASIC15.67■□□□□ 0.1
Nkx2-2P42586 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-2P42586 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx2-2P42586 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.66■□□□□ 0.1
Nkx2-2P42586 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx2-2P42586 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-2P42586 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-2P42586 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-2P42586 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.65■□□□□ 0.1
Nkx2-2P42586 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-2P42586 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms