Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Cxcl12P40224 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.63■□□□□ 0.41
Cxcl12P40224 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cxcl12P40224 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cxcl12P40224 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Cxcl12P40224 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cxcl12P40224 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.62■□□□□ 0.41
Cxcl12P40224 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cxcl12P40224 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cxcl12P40224 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cxcl12P40224 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cxcl12P40224 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.62■□□□□ 0.41
Cxcl12P40224 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cxcl12P40224 Phf7-203ENSMUST00000226565 1971 ntBASIC17.62■□□□□ 0.41
Cxcl12P40224 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cxcl12P40224 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.62■□□□□ 0.41
Cxcl12P40224 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cxcl12P40224 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cxcl12P40224 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcl12P40224 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcl12P40224 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcl12P40224 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcl12P40224 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcl12P40224 Gm11779-201ENSMUST00000118541 368 ntBASIC17.61■□□□□ 0.41
Cxcl12P40224 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.61■□□□□ 0.41
Cxcl12P40224 Gm27867-201ENSMUST00000184778 125 ntBASIC17.61■□□□□ 0.41
Cxcl12P40224 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.61■□□□□ 0.41
Cxcl12P40224 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcl12P40224 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcl12P40224 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcl12P40224 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcl12P40224 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcl12P40224 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcl12P40224 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcl12P40224 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcl12P40224 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcl12P40224 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cxcl12P40224 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcl12P40224 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcl12P40224 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcl12P40224 Golph3-205ENSMUST00000228671 2842 ntBASIC17.6■□□□□ 0.41
Cxcl12P40224 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcl12P40224 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Cxcl12P40224 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.6■□□□□ 0.41
Cxcl12P40224 Gm43575-201ENSMUST00000196420 516 ntBASIC17.6■□□□□ 0.41
Cxcl12P40224 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcl12P40224 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcl12P40224 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.6■□□□□ 0.41
Cxcl12P40224 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcl12P40224 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cxcl12P40224 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.6■□□□□ 0.41
Cxcl12P40224 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcl12P40224 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.59■□□□□ 0.41
Cxcl12P40224 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcl12P40224 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcl12P40224 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.59■□□□□ 0.41
Cxcl12P40224 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcl12P40224 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm15165-201ENSMUST00000118140 502 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm15467-201ENSMUST00000120582 445 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm27000-201ENSMUST00000182943 842 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Mir8112-201ENSMUST00000184382 131 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm7063-201ENSMUST00000186840 981 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm44357-201ENSMUST00000195897 142 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm19658-201ENSMUST00000196231 138 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm44367-201ENSMUST00000196836 138 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm44350-201ENSMUST00000197197 138 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm44390-201ENSMUST00000197533 144 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm44313-201ENSMUST00000198018 138 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm44486-201ENSMUST00000198508 138 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm44454-201ENSMUST00000198541 138 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm44314-201ENSMUST00000199263 138 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm44394-201ENSMUST00000199558 138 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm44484-201ENSMUST00000199873 138 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm44466-201ENSMUST00000200264 138 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Gm44359-201ENSMUST00000200671 138 ntBASIC17.59■□□□□ 0.41
Cxcl12P40224 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcl12P40224 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcl12P40224 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcl12P40224 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cxcl12P40224 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.59■□□□□ 0.41
Cxcl12P40224 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cxcl12P40224 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cxcl12P40224 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cxcl12P40224 Notumos-201ENSMUST00000151998 2659 ntBASIC17.58■□□□□ 0.41
Cxcl12P40224 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cxcl12P40224 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cxcl12P40224 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Cxcl12P40224 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cxcl12P40224 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms