Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Timp3P39876 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Timp3P39876 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Timp3P39876 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Timp3P39876 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Timp3P39876 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Timp3P39876 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Timp3P39876 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Timp3P39876 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Timp3P39876 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Timp3P39876 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Timp3P39876 Gm7889-201ENSMUST00000185591 958 ntBASIC14.01□□□□□ -0.17
Timp3P39876 Gm38027-201ENSMUST00000192315 235 ntBASIC14.01□□□□□ -0.17
Timp3P39876 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Timp3P39876 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Timp3P39876 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Timp3P39876 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Timp3P39876 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Timp3P39876 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Timp3P39876 Gm43338-201ENSMUST00000198617 2223 ntBASIC14□□□□□ -0.17
Timp3P39876 Tgds-204ENSMUST00000228543 1594 ntBASIC14□□□□□ -0.17
Timp3P39876 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Timp3P39876 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Timp3P39876 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Timp3P39876 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14□□□□□ -0.17
Timp3P39876 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14□□□□□ -0.17
Timp3P39876 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14□□□□□ -0.17
Timp3P39876 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14□□□□□ -0.17
Timp3P39876 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14□□□□□ -0.17
Timp3P39876 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Timp3P39876 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14□□□□□ -0.17
Timp3P39876 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Timp3P39876 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14□□□□□ -0.17
Timp3P39876 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Timp3P39876 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14□□□□□ -0.17
Timp3P39876 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Timp3P39876 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Timp3P39876 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Timp3P39876 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Timp3P39876 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14□□□□□ -0.17
Timp3P39876 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14□□□□□ -0.17
Timp3P39876 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Timp3P39876 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14□□□□□ -0.17
Timp3P39876 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Timp3P39876 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Timp3P39876 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Timp3P39876 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Timp3P39876 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.99□□□□□ -0.17
Timp3P39876 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Timp3P39876 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Timp3P39876 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Timp3P39876 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Timp3P39876 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Timp3P39876 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Timp3P39876 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Timp3P39876 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Timp3P39876 Gm12085-201ENSMUST00000119263 940 ntBASIC13.99□□□□□ -0.17
Timp3P39876 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Timp3P39876 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Timp3P39876 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.99□□□□□ -0.17
Timp3P39876 Gm18959-201ENSMUST00000208954 655 ntBASIC13.99□□□□□ -0.17
Timp3P39876 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Timp3P39876 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Timp3P39876 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Timp3P39876 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.99□□□□□ -0.17
Timp3P39876 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Timp3P39876 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Timp3P39876 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Timp3P39876 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.98□□□□□ -0.17
Timp3P39876 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Timp3P39876 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Timp3P39876 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.98□□□□□ -0.17
Timp3P39876 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Timp3P39876 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Timp3P39876 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Timp3P39876 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms