Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Col2a1P28481 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col2a1P28481 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.42■□□□□ 0.7
Col2a1P28481 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
Col2a1P28481 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.41■□□□□ 0.7
Col2a1P28481 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Col2a1P28481 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Col2a1P28481 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.41■□□□□ 0.7
Col2a1P28481 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.41■□□□□ 0.7
Col2a1P28481 Gm34391-201ENSMUST00000203706 907 ntBASIC19.41■□□□□ 0.7
Col2a1P28481 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.41■□□□□ 0.7
Col2a1P28481 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Col2a1P28481 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Col2a1P28481 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col2a1P28481 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col2a1P28481 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col2a1P28481 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.41■□□□□ 0.7
Col2a1P28481 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col2a1P28481 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col2a1P28481 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col2a1P28481 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col2a1P28481 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.41■□□□□ 0.7
Col2a1P28481 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col2a1P28481 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.41■□□□□ 0.7
Col2a1P28481 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.41■□□□□ 0.7
Col2a1P28481 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.41■□□□□ 0.7
Col2a1P28481 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col2a1P28481 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col2a1P28481 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col2a1P28481 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Col2a1P28481 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col2a1P28481 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col2a1P28481 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.4■□□□□ 0.7
Col2a1P28481 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Col2a1P28481 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.4■□□□□ 0.7
Col2a1P28481 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col2a1P28481 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Col2a1P28481 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.4■□□□□ 0.7
Col2a1P28481 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col2a1P28481 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.4■□□□□ 0.7
Col2a1P28481 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.4■□□□□ 0.7
Col2a1P28481 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col2a1P28481 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col2a1P28481 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.4■□□□□ 0.7
Col2a1P28481 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col2a1P28481 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col2a1P28481 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Col2a1P28481 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col2a1P28481 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col2a1P28481 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col2a1P28481 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col2a1P28481 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.39■□□□□ 0.69
Col2a1P28481 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col2a1P28481 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.39■□□□□ 0.69
Col2a1P28481 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col2a1P28481 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col2a1P28481 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Col2a1P28481 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col2a1P28481 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col2a1P28481 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col2a1P28481 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col2a1P28481 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col2a1P28481 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Col2a1P28481 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col2a1P28481 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.38■□□□□ 0.69
Col2a1P28481 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Col2a1P28481 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.38■□□□□ 0.69
Col2a1P28481 Gm15372-201ENSMUST00000120729 834 ntBASIC19.38■□□□□ 0.69
Col2a1P28481 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.38■□□□□ 0.69
Col2a1P28481 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Col2a1P28481 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col2a1P28481 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.38■□□□□ 0.69
Col2a1P28481 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Col2a1P28481 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col2a1P28481 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col2a1P28481 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col2a1P28481 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.38■□□□□ 0.69
Col2a1P28481 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col2a1P28481 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col2a1P28481 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col2a1P28481 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col2a1P28481 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col2a1P28481 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col2a1P28481 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.37■□□□□ 0.69
Col2a1P28481 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col2a1P28481 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col2a1P28481 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.37■□□□□ 0.69
Col2a1P28481 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col2a1P28481 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col2a1P28481 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.37■□□□□ 0.69
Col2a1P28481 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col2a1P28481 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.37■□□□□ 0.69
Col2a1P28481 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col2a1P28481 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col2a1P28481 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col2a1P28481 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col2a1P28481 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col2a1P28481 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Col2a1P28481 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col2a1P28481 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms