Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6aP27664 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6aP27664 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6aP27664 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6aP27664 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.84■□□□□ 0.77
Pde6aP27664 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.84■□□□□ 0.77
Pde6aP27664 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.84■□□□□ 0.77
Pde6aP27664 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6aP27664 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6aP27664 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6aP27664 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6aP27664 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.84■□□□□ 0.77
Pde6aP27664 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pde6aP27664 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pde6aP27664 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pde6aP27664 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pde6aP27664 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pde6aP27664 Gm18958-201ENSMUST00000174258 762 ntBASIC19.83■□□□□ 0.77
Pde6aP27664 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.83■□□□□ 0.77
Pde6aP27664 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pde6aP27664 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pde6aP27664 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pde6aP27664 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pde6aP27664 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pde6aP27664 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Pde6aP27664 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pde6aP27664 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.83■□□□□ 0.76
Pde6aP27664 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Pde6aP27664 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6aP27664 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Pde6aP27664 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.82■□□□□ 0.76
Pde6aP27664 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.82■□□□□ 0.76
Pde6aP27664 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pde6aP27664 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6aP27664 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6aP27664 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6aP27664 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6aP27664 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6aP27664 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6aP27664 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6aP27664 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6aP27664 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6aP27664 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6aP27664 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.81■□□□□ 0.76
Pde6aP27664 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.81■□□□□ 0.76
Pde6aP27664 Mir7071-201ENSMUST00000184847 69 ntBASIC19.81■□□□□ 0.76
Pde6aP27664 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.81■□□□□ 0.76
Pde6aP27664 Gm9987-201ENSMUST00000069768 567 ntBASIC19.81■□□□□ 0.76
Pde6aP27664 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6aP27664 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6aP27664 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6aP27664 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6aP27664 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6aP27664 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pde6aP27664 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
Pde6aP27664 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6aP27664 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.8■□□□□ 0.76
Pde6aP27664 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6aP27664 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6aP27664 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6aP27664 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6aP27664 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pde6aP27664 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pde6aP27664 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pde6aP27664 Gm16061-201ENSMUST00000122167 857 ntBASIC19.8■□□□□ 0.76
Pde6aP27664 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.8■□□□□ 0.76
Pde6aP27664 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pde6aP27664 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pde6aP27664 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pde6aP27664 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pde6aP27664 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Pde6aP27664 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6aP27664 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6aP27664 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6aP27664 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6aP27664 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6aP27664 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6aP27664 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6aP27664 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6aP27664 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6aP27664 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6aP27664 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6aP27664 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6aP27664 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.79■□□□□ 0.76
Pde6aP27664 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6aP27664 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6aP27664 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6aP27664 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6aP27664 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6aP27664 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Pde6aP27664 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6aP27664 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pde6aP27664 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pde6aP27664 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6aP27664 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6aP27664 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6aP27664 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6aP27664 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pde6aP27664 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pde6aP27664 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms