Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.32■□□□□ 0.52
Aldh1a1P24549 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.32■□□□□ 0.52
Aldh1a1P24549 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Aldh1a1P24549 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Aldh1a1P24549 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Aldh1a1P24549 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Aldh1a1P24549 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Aldh1a1P24549 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aldh1a1P24549 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Aldh1a1P24549 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aldh1a1P24549 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.31■□□□□ 0.52
Aldh1a1P24549 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aldh1a1P24549 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aldh1a1P24549 Idnk-204ENSMUST00000226010 1898 ntBASIC18.31■□□□□ 0.52
Aldh1a1P24549 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aldh1a1P24549 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Aldh1a1P24549 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.31■□□□□ 0.52
Aldh1a1P24549 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Aldh1a1P24549 Gm13186-201ENSMUST00000118031 316 ntBASIC18.31■□□□□ 0.52
Aldh1a1P24549 Gm12644-201ENSMUST00000119935 606 ntBASIC18.31■□□□□ 0.52
Aldh1a1P24549 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aldh1a1P24549 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Aldh1a1P24549 Rprl3-201ENSMUST00000157400 290 ntBASIC18.31■□□□□ 0.52
Aldh1a1P24549 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aldh1a1P24549 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Aldh1a1P24549 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aldh1a1P24549 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.31■□□□□ 0.52
Aldh1a1P24549 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Aldh1a1P24549 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Aldh1a1P24549 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Gm2651-201ENSMUST00000203560 838 ntBASIC18.3■□□□□ 0.52
Aldh1a1P24549 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.3■□□□□ 0.52
Aldh1a1P24549 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Aldh1a1P24549 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Aldh1a1P24549 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aldh1a1P24549 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.29■□□□□ 0.52
Aldh1a1P24549 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.29■□□□□ 0.52
Aldh1a1P24549 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Aldh1a1P24549 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Aldh1a1P24549 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Aldh1a1P24549 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Aldh1a1P24549 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Aldh1a1P24549 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Aldh1a1P24549 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Aldh1a1P24549 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.27■□□□□ 0.52
Aldh1a1P24549 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Aldh1a1P24549 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Aldh1a1P24549 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Aldh1a1P24549 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Aldh1a1P24549 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Aldh1a1P24549 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.27■□□□□ 0.52
Aldh1a1P24549 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.27■□□□□ 0.52
Aldh1a1P24549 Gm27000-201ENSMUST00000182943 842 ntBASIC18.27■□□□□ 0.52
Aldh1a1P24549 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms