Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.66■□□□□ 0.42
Hoxd8P23463 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxd8P23463 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.66■□□□□ 0.42
Hoxd8P23463 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxd8P23463 Birc2-201ENSMUST00000054878 378 ntBASIC17.66■□□□□ 0.42
Hoxd8P23463 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxd8P23463 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxd8P23463 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hoxd8P23463 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxd8P23463 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxd8P23463 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxd8P23463 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.66■□□□□ 0.42
Hoxd8P23463 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxd8P23463 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxd8P23463 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hoxd8P23463 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Hoxd8P23463 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.65■□□□□ 0.42
Hoxd8P23463 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.65■□□□□ 0.42
Hoxd8P23463 Gm18421-201ENSMUST00000204122 625 ntBASIC17.65■□□□□ 0.42
Hoxd8P23463 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.65■□□□□ 0.42
Hoxd8P23463 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Hoxd8P23463 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Hoxd8P23463 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Hoxd8P23463 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.65■□□□□ 0.42
Hoxd8P23463 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxd8P23463 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Hoxd8P23463 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hoxd8P23463 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hoxd8P23463 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Hoxd8P23463 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxd8P23463 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxd8P23463 Gm24589-201ENSMUST00000116692 94 ntBASIC17.64■□□□□ 0.41
Hoxd8P23463 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxd8P23463 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.64■□□□□ 0.41
Hoxd8P23463 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.64■□□□□ 0.41
Hoxd8P23463 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.64■□□□□ 0.41
Hoxd8P23463 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.64■□□□□ 0.41
Hoxd8P23463 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.64■□□□□ 0.41
Hoxd8P23463 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxd8P23463 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxd8P23463 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.64■□□□□ 0.41
Hoxd8P23463 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxd8P23463 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxd8P23463 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxd8P23463 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxd8P23463 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.63■□□□□ 0.41
Hoxd8P23463 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxd8P23463 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxd8P23463 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.63■□□□□ 0.41
Hoxd8P23463 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.63■□□□□ 0.41
Hoxd8P23463 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.63■□□□□ 0.41
Hoxd8P23463 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxd8P23463 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hoxd8P23463 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxd8P23463 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxd8P23463 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.63■□□□□ 0.41
Hoxd8P23463 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxd8P23463 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Hoxd8P23463 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxd8P23463 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxd8P23463 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hoxd8P23463 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxd8P23463 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxd8P23463 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Hoxd8P23463 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.62■□□□□ 0.41
Hoxd8P23463 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxd8P23463 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Hoxd8P23463 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.62■□□□□ 0.41
Hoxd8P23463 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxd8P23463 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.62■□□□□ 0.41
Hoxd8P23463 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxd8P23463 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.62■□□□□ 0.41
Hoxd8P23463 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxd8P23463 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxd8P23463 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxd8P23463 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hoxd8P23463 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxd8P23463 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxd8P23463 Gm15372-201ENSMUST00000120729 834 ntBASIC17.61■□□□□ 0.41
Hoxd8P23463 Gm12895-201ENSMUST00000122214 226 ntBASIC17.61■□□□□ 0.41
Hoxd8P23463 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Hoxd8P23463 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms