Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6bP23440 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pde6bP23440 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6bP23440 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Pde6bP23440 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6bP23440 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.62■□□□□ 0.57
Pde6bP23440 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pde6bP23440 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6bP23440 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6bP23440 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6bP23440 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6bP23440 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6bP23440 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pde6bP23440 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.62■□□□□ 0.57
Pde6bP23440 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.61■□□□□ 0.57
Pde6bP23440 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6bP23440 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.61■□□□□ 0.57
Pde6bP23440 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6bP23440 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6bP23440 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6bP23440 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6bP23440 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6bP23440 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6bP23440 Gm27704-201ENSMUST00000185094 107 ntBASIC18.61■□□□□ 0.57
Pde6bP23440 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6bP23440 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6bP23440 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6bP23440 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6bP23440 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6bP23440 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6bP23440 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6bP23440 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pde6bP23440 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pde6bP23440 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.61■□□□□ 0.57
Pde6bP23440 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6bP23440 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
Pde6bP23440 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6bP23440 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6bP23440 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.6■□□□□ 0.57
Pde6bP23440 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6bP23440 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6bP23440 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6bP23440 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6bP23440 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6bP23440 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6bP23440 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6bP23440 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6bP23440 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.6■□□□□ 0.57
Pde6bP23440 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6bP23440 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6bP23440 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6bP23440 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pde6bP23440 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.6■□□□□ 0.57
Pde6bP23440 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.6■□□□□ 0.57
Pde6bP23440 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6bP23440 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6bP23440 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6bP23440 Gm11355-201ENSMUST00000121120 306 ntBASIC18.59■□□□□ 0.57
Pde6bP23440 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6bP23440 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.59■□□□□ 0.57
Pde6bP23440 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6bP23440 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.59■□□□□ 0.57
Pde6bP23440 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.59■□□□□ 0.57
Pde6bP23440 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6bP23440 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6bP23440 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6bP23440 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.59■□□□□ 0.57
Pde6bP23440 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6bP23440 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6bP23440 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6bP23440 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6bP23440 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6bP23440 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.59■□□□□ 0.57
Pde6bP23440 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pde6bP23440 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6bP23440 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pde6bP23440 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Pde6bP23440 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pde6bP23440 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Pde6bP23440 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pde6bP23440 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pde6bP23440 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pde6bP23440 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pde6bP23440 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Pde6bP23440 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.58■□□□□ 0.56
Pde6bP23440 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.58■□□□□ 0.56
Pde6bP23440 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.58■□□□□ 0.56
Pde6bP23440 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.58■□□□□ 0.56
Pde6bP23440 Gm29518-201ENSMUST00000190858 372 ntBASIC18.58■□□□□ 0.56
Pde6bP23440 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6bP23440 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6bP23440 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6bP23440 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6bP23440 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6bP23440 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Pde6bP23440 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6bP23440 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6bP23440 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6bP23440 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pde6bP23440 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms